Pantoea anthophila: OJ965_16295
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Entry
OJ965_16295 CDS
T08866
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pano
Pantoea anthophila
Pathway
pano01501
beta-Lactam resistance
pano01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OJ965_16295
01503 Cationic antimicrobial peptide (CAMP) resistance
OJ965_16295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pano03036
]
OJ965_16295
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pano02000
]
OJ965_16295
01504 Antimicrobial resistance genes [BR:
pano01504
]
OJ965_16295
Chromosome and associated proteins [BR:
pano03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OJ965_16295
Transporters [BR:
pano02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OJ965_16295
Antimicrobial resistance genes [BR:
pano01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OJ965_16295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
HH_CzcB
BSH_CzcB
HH_EMRA
CzcB_C
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UZH02245
LinkDB
All DBs
Position
2942394..2943587
Genome browser
AA seq
397 aa
AA seq
DB search
MNKIRGLSPLAAVLMLSGSFLLTGCDNNKSEQAAQQPPEVGVVTLKTEPLKISTELPGRT
SAYRVAEVRPQVSGIILKRNFIEGSDIKAGQSLYQIDPATYQAAYDSAKGDLTQAQANAR
IAQLTVKRYKPLLGTKYISQQDYDTAVATAAQNDAAVQVAKANVETARINLAYTKVTSPI
SGRIGKSSVTEGALVQSAQTTALATVQQLDPMYVDVTQSSEDFMRLRSELESGQLKQTDG
KASVTLLMQNGNTFAQKGTLEFSDVTVDETTGSITLRAIVPNPDHTLLPGMFVRARLEEG
TNPNALLVPQQAVTRTPTGQATVMVVGADNKVESRQVTTSQAIGDKWLVTDGVKAGERVI
STGLQRAKPGAQVTPQEVSDDAKAAPDSKPQSDKSSS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatcagaggattatcgcctctggcggccgtcctgatgctatcaggcagcttt
ttgttaacaggatgtgacaacaataaatccgaacaagccgcccagcaaccgccagaagtg
ggtgtcgtgaccctgaaaactgaacccctgaaaatttcgactgaacttccaggccgtacc
tcagcctatcgcgtggctgaagtacgtccgcaggtttccggtatcattctcaagcgtaac
tttattgaaggcagtgatatcaaagccggtcagtctctctatcagatcgacccggccacc
tatcaggctgcttatgacagcgcgaaaggcgatttaacccaggcgcaggccaacgcccgc
atcgctcagctgaccgttaagcgttacaagccactgctcggcacgaaatatatcagtcag
caggattacgacacggcggttgccacggctgcgcagaatgacgcagcggtccaggtggca
aaagctaacgtggaaacggctcgcattaatctggcctacaccaaagtcacctcccctatc
agcggccgcatcggcaaatcgtcagtcaccgagggtgcgctggttcaaagcgcccagacc
accgcgctggcgaccgtgcaacagcttgacccgatgtatgtcgatgtgacccagtcgagc
gaagatttcatgcgcttacgttcagagctggagtcaggtcagctgaagcagaccgatggc
aaagccagcgtgaccctgctgatgcagaacggcaacacttttgcgcagaagggaacactg
gagttctctgacgtcaccgtcgatgagaccaccggctccatcaccctgcgtgccattgtc
ccgaacccggaccataccctgttaccgggcatgtttgtgcgcgcgcgtctggaggaaggg
accaatccgaatgcgttgctggttccacagcaggcggtcacccgcacgccaacaggccag
gcgacggtcatggtggtcggcgcagacaacaaagttgaatcgcgtcaggtcacaacctca
caggcgattggcgacaaatggttagtcaccgacggcgttaaagcgggtgaacgtgtgatc
agcacaggtctgcagcgagccaagccgggcgcacaggttaccccacaagaagtctcagac
gatgcgaaagcggcacccgattctaagccgcagtctgacaagtcatcgtcataa
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