Pantoea sp. SO10: FCN45_03685
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Entry
FCN45_03685 CDS
T06053
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
FCN45_03685 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_03685 (dksA)
03021 Transcription machinery [BR:
pans03021
]
FCN45_03685 (dksA)
03009 Ribosome biogenesis [BR:
pans03009
]
FCN45_03685 (dksA)
Transcription factors [BR:
pans03000
]
Prokaryotic type
Other transcription factors
Others
FCN45_03685 (dksA)
Transcription machinery [BR:
pans03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
FCN45_03685 (dksA)
Ribosome biogenesis [BR:
pans03009
]
Prokaryotic type
rRNA transcription factors
FCN45_03685 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
YDL186W
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QCP58538
LinkDB
All DBs
Position
complement(816420..816875)
Genome browser
AA seq
151 aa
AA seq
DB search
MQEGQNRKTSSLSILAIAGVEPYQVKPGEEYMNDAQLGHFRKILEAWRNQLRDEVDRTVS
HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVDDDDFGYCDSCGVE
IGIRRLEARPTADLCIDCKTLAEIREKQMAG
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagggcaaaaccgtaaaacatcgtccctgagtatcctcgccatcgctggagtg
gagccgtatcaggtgaaaccgggcgaagagtatatgaacgacgcccagctaggccatttc
cgtaagattctggaagcctggcgcaaccaacttcgggatgaagtagatcgcactgtgtca
catatgcaggacgaagctgccaacttcccggatccggtcgaccgtgctgcgcaggaagaa
gagttcagcctggaattgcgtaaccgcgatcgtgagcgcaaactcattaaaaagattgag
aaaacgctcaagaaagtggatgacgacgatttcggttactgcgactcctgcggtgtagaa
attggtattcgccgccttgaagcgcgtccgactgccgatctctgcattgactgcaaaacg
ctggcagaaatccgcgagaagcagatggctggctaa
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