Pantoea sp. SO10: FCN45_19220 Help Entry FCN45_19220       CDS       T06053                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pans  Pantoea sp. SO10 Pathway pans03030   DNA replication pans03410   Base excision repair pans03420   Nucleotide excision repair pans03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pans00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FCN45_19220 (ligB)    03410 Base excision repair     FCN45_19220 (ligB)    03420 Nucleotide excision repair     FCN45_19220 (ligB)    03430 Mismatch repair     FCN45_19220 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pans03032]     FCN45_19220 (ligB)    03400 DNA repair and recombination proteins [BR:pans03400]     FCN45_19220 (ligB) Enzymes [BR:pans01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FCN45_19220 (ligB) DNA replication proteins [BR:pans03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FCN45_19220 (ligB) DNA repair and recombination proteins [BR:pans03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FCN45_19220 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      FCN45_19220 (ligB)    MMR (mismatch excision repair)     DNA ligase      FCN45_19220 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FCN45_19220 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH HHH_5 RNA_ligase Nlig-Ia Expansin_C HHH_2 Motif Other DBs NCBI-ProteinID:  QCP61388 LinkDB All DBs Position complement(4141102..4142871) Genome browser AA seq 589 aa AA seqDB search MKGCLSLLCCLFSIGCWAEALCPNWSPVRAGQEITQLQTQLRQWDDAYYRQGTNLVTDAD YDSLQQRLQQWQRCFTPAHATYDAQLTTDGSTHHPVAHTGVRKLRDKLEVAYWMQDKSAL WLQPKVDGVAVTLVYRQGKLASLISRGDGLRGEEWLAKSAHIPSIPQQLDTLREEVVLQG ELFLQMTDHQQARDGGKNARAQVAGAMMRHDNSPLLEQLSVFIWAWPDGPNSMPDRLAQL TQWGFGLAQSWSRQVSNEEEVAVWRDRWFRESLPFVTDGVVIHQSPVSAGRDWQPGQGSW SAAWKYQPAEVSSEVLSVDFNVGRTGKIAVVLNLIPVQLEDKTVRRVNIGSLRRWRELDV IAGDEVTLTLAGLGIPRLERVIWRVAQRDYPASPQEGEFHGLTCLHFSADCRAQFLSRLS WLSQKSVLDIAGVQRSSWQRLLDSGAISHLFSWLTLTPDQIAQANGITPARAQLIWHRFN LTREQPLRRWVSALGLPLPRAALQALPDAQWSQLLARTAESWQQLPGIGSVLAQRIVMML QDAHLQQLIHFLQQQEIPATDSMFRMGIVEDRQTEAETQRQQAGEEAEQ NT seq 1770 nt NT seq  +upstreamnt  +downstreamnt atgaaaggatgcctgagtctattgtgttgcttattcagtataggttgctgggccgaagcg ctctgcccgaattggtcgccggtgcgcgcggggcaggaaatcacacagctgcaaacccag ctacgacagtgggatgacgcgtattaccggcagggcacaaatctggtgaccgatgccgat tacgacagcctgcaacagcgattacagcagtggcagcgctgtttcactccggcgcacgcc acctacgatgcacaactcaccaccgacggcagtacgcatcatccggtggcgcataccggc gtgcgcaaactgcgcgataagctggaagtggcgtactggatgcaggacaaatctgcgcta tggctgcagccgaaagtcgatggcgtcgccgttactttggtatatcgacagggtaagttg gcctcattgatcagtcgcggtgatggtttacgtggcgaagagtggctggccaaatccgca catattccctccatcccgcagcagctggataccttgcgcgaggaagtggtgctgcagggt gagctgtttctgcaaatgaccgatcatcaacaggcgcgtgacggcggcaagaacgcgcgc gcgcaggtggcgggagcgatgatgcgccacgacaacagcccgctacttgagcagcttagc gtatttatctgggcgtggccggatggacccaattcaatgcccgatcgtctggcgcagctc acacaatggggatttgggctggcgcagagctggagccgtcaggtgagtaatgaagaagag gtcgcggtatggcgcgatcgctggttccgcgaatcgctgccgtttgtcaccgatggcgtg gtaattcatcaatcacccgtcagcgcagggcgcgattggcagcccggccagggcagttgg tcagcggcatggaagtatcaaccagcagaagtcagcagcgaagtgctgtcagtggatttc aatgtgggccgcacgggcaagatcgccgtggtgctaaatctgataccggtgcaactggag gacaaaacggtacgccgggtaaacattggttccctgcgacgctggcgggaactggatgtg atcgcgggtgatgaggtgacgctcacgctggcgggattaggcattccgcgactggagcgc gtgatttggcgtgtggcgcagcgcgattatccagcgtcgccacaggagggcgaattccac ggcttaacctgtctgcactttagcgccgactgccgggcgcagtttttatctcgccttagc tggctcagccagaagtcggtactcgatattgcgggtgttcagcgcagcagctggcagcgc ctgctggatagcggcgctatcagccatctcttttcctggctgacactgacgccggatcag attgcgcaggctaatggcatcacgccggctcgcgcgcaacttatctggcaccgctttaac ctgacgcgtgagcagccgctgcgacgctgggtgagtgcgcttggcttgccgttgccgcgt gcagcgttacaggctttaccggatgcgcagtggtcgcagttgctggcgcgaacggcggaa agctggcagcaactgcccggtatcggtagcgtgttagcacaacggattgtgatgatgctg caggatgcgcacctgcagcagttgattcactttctgcagcagcaggagattcctgcaact gattcaatgttcaggatggggatagttgaagatcggcaaaccgaggcggaaacgcagcgc cagcaagcgggcgaagaagccgaacagtag

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