Pantoea sp. PSNIH1: PSNIH1_08425
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Entry
PSNIH1_08425 CDS
T03464
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant00540
Lipopolysaccharide biosynthesis
pant01100
Metabolic pathways
Module
pant_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PSNIH1_08425 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pant01005
]
PSNIH1_08425 (lpxC)
Enzymes [BR:
pant01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PSNIH1_08425 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pant01005
]
Lipid A
PSNIH1_08425 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AIX50256
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All DBs
Position
1761655..1762572
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTLRPASANTGVIYRRTDLNPPVDFPADAKYVRDT
MLSTCLVNDEGVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFVYLLMDAGV
EELNSAKKFVRVKQAVRVEDGDKWAEIKPYNGFSLDFTIDFKHPAIDSSSQRYQLNFSAE
AFVRQISRARTFGFMREIEYLQSKGLCLGGSLDCAIGLDDFRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNVIGAFSAFKSGHALNNKLLQAVLAKQEAWEWATFEDEAELPLAFKAP
NLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacactaaaacgtattgttcaggcgactggcgtcggtttacatacc
ggcaaaaaagtcacgctgactttacgccctgcgtcggctaacaccggggtcatctatcgt
cgcaccgacttgaatccaccggttgatttcccggctgatgcaaaatacgtgcgcgacacc
atgctgagtacctgcctggtgaacgatgaaggcgtacgtatttcaacggtagaacacctg
aacgccgcgctggcgggtctgggtatcgataacattattgtggaagtcgatgcaccagaa
attccaattatggatggcagcgcagcacctttcgtctacctgctgatggatgcaggtgtg
gaagagcttaacagcgcgaaaaaatttgtacgcgttaagcaggcggtacgggtagaagat
ggtgataagtgggctgagatcaaaccgtataacggtttctcgctcgatttcactatcgat
ttcaaacatccggctatcgattcaagctcgcagcgttaccagctcaacttctcggctgag
gcatttgtccgccagatcagccgtgcgcgcacctttggctttatgcgtgaaattgaatat
ctgcagtctaaaggcctgtgcctgggcggtagtttagattgtgcgattggccttgatgat
ttccgcgtgctgaatgaagatggcctgcgctttgaagatgagtttgtacgacacaaaatg
ctggatgctatcggcgatttgtttatgtgtggtcacaacgtgattggtgccttttcggcg
tttaaatcaggccatgcgttaaacaacaagctgctgcaggctgtcctggcgaaacaggaa
gcctgggagtgggccaccttcgaagatgaagctgagctgccgctggcgtttaaagcacct
aatttagtcctggcttaa
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