Papio anubis (olive baboon): 101007001
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Entry
101007001 CDS
T07474
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
panu
Papio anubis (olive baboon)
Brite
KEGG Orthology (KO) [BR:
panu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
panu03037
]
101007001 (PCDH15)
04515 Cell adhesion molecules [BR:
panu04515
]
101007001 (PCDH15)
Cilium and associated proteins [BR:
panu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101007001 (PCDH15)
Cell adhesion molecules [BR:
panu04515
]
Cadherins
Protocadherins
101007001 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
PRIMA1
Motif
Other DBs
NCBI-GeneID:
101007001
NCBI-ProteinID:
XP_031508481
Ensembl:
ENSPANG00000022002
LinkDB
All DBs
Position
11:complement(49948441..50863367)
Genome browser
AA seq
1667 aa
AA seq
DB search
MNFFSVCVPLQSILTFHYFLSLDCKLARGGPPATIVAIDEESRNGTILVDNMLIKGTAGG
PDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCINKKVGTI
IYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIE
YVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQANDRAQNLNERRTTT
TTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIVVTPPIQAID
QDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQKFDLVIKAE
QDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIADSLNLTSPLRIVA
LDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSITAFDGVQ
ESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGSNGEITYEI
LVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNALPAERRHSICTVYIEVLPP
NNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTG
ILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAPVFDPYLPRNLSVV
EEEANAFVGQVKATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNREVRDYYELV
VVATDGAVHPRHSTVTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEAKDVDL
GANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTMPPG
IATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVD
DVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKILVLH
PGEIPRFTQEEYRPPPVSELATKGTMVGVISAAAINQSIVYSIVSGNEEDTFGINNITGV
IYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNHPPVFQKKF
YIGGVSEDARMFTSVLRVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETYTGLIKTAM
LFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLT
EILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAIDRNELFK
FLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLALAFIIILCC
IPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAAPAPAPVAAPPPPPPPPPGAHLY
EELGDSSMYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEWARKRMIKLVVDREYE
TSSTGEDSAPECQRHRLHHPSIHSNINGNIYIAQNGSVVRTRRACLTDNLKVASPVRLGR
HFKKLDKLAVTHEENVPLNTLSKGPFSTEKMNARPTLVTFAPCPVGTDNTAVKTLGNRLK
STVEQESMIDSKNIKEALEFHSDHTQSDDEELWMGPWNNLHIPMTKL
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttctcagtgtgtgtgcccctgcagtcaattcttacttttcattattttctc
tctttagattgcaaactagctaggggaggacctccagctaccatagttgctattgatgaa
gagagtcggaatggtacaattctggtggacaacatgctgatcaaagggactgctggagga
ccagaccccaccatagaactttctttaaaggacaatgtggattactgggtgttgatggat
cctgttaagcaaatgcttttcctgaacagcaccgggagagttctggatagagatccaccg
atgaacatacactccattgtggtgcaggtccagtgcatcaacaaaaaagtgggcacgatt
atctaccatgaagtgcgaatagtggtgagagacaggaatgacaactcacccactttcaag
catgaaagctactatgccacagtaaacgagctcactccagttggtaccacgatattcaca
ggattttcaggagacaatggagctacagatatagatgatggaccaaatggacagatagag
tacgttattcagtataatccagatgatccgacatccaatgacacctttgaaattccccta
atgttgactggaaatgtagtgttaaggaagagactcaactatgaagataagactcgctac
tttgtcataatccaagctaatgaccgtgcccaaaatctgaacgagaggcgaaccaccacc
accactctcacagtggatgttctggatggagatgacttaggtccaatgtttcttccttgt
gtccttgtgccaaacactcgtgattgccgtccactcacttatcaagctgccatacctgag
ttgagaactccggaagaactgaaccccattgttgttacaccaccaatccaagccatagat
caggaccgaaatattcaaccgccatcagataggccaggaatcctctattccatccttgtt
gggactcctgaggattacccacggtttttccatatgcatcctaggacagcagaacttagt
ctcctggagccagtcaacagagactttcaccagaaatttgatttggttattaaggctgaa
caagacaatggtcatcctcttcctgcctttgccagtctacacattgaaatactggatgaa
aacaatcaaagcccatattttacaatgcccagttaccaaggctatatcctggaatctgcc
ccagtgggagcaaccattgcggacagtctcaatttgacctcacctttaagaatagtagct
ctggacaaggacatagaagatacaaaagacccagagcttcacctttttctgaatgactac
acctcagtcttcaccgtcacacagactggtattactcgctacctcaccttacttcaacca
gtggacagggaagaacagcaaacttacaccttttcgataacagcatttgatggtgtacaa
gaaagtgagccagtcatcgtcaatattcaagtgatggatgcaaatgataacacaccaacc
ttccctgaaatatcctatgatgtgtatgtttatacagatatgagacctggggacagtgtc
atacagctcactgcagttgacgcagacgaagggtcaaatggggagatcacatatgaaatc
cttgttggggctcagggagacttcatcatcaataaaacaacagggcttatcaccatcgct
ccgggggtggaaatgatagtcggacggacttatgcactcaccgtccaagcagcggataat
gctcttcctgcagagagaaggcactccatctgcactgtgtacattgaagtgcttccacca
aataatcaaagccctcctcgcttcccacagctgatgtatagccttgaaattagtgaagcc
atgagggttggtgctgttttattaaatctacaggcaactgatcgagagggagacccaata
acatatgccattgagaatggagatcctcagagagtttttaatctttcagaaaccacgggg
attctaaccttagggaaagcactggacagggaaagcactgatcgctacattctgatcatc
acagcttcagatggcaggccagatgggacctcaactgccacagtaaacgtggtggtgaca
gatgtcaatgacaatgctccagtgtttgatccttatctgccaagaaatttatctgtggtg
gaggaagaagccaatgcctttgtgggtcaagtaaaagcaacagaccccgatgctggaata
aatggtcaagtgcactacagtttgggtaactttaataatctttttcgtatcacatccaat
gggagcatttacacagcagtgaagcttaacagagaagttagggactactatgaacttgtt
gttgtggcaacagatggagcagtacaccctcgtcattcaactgtaaccctggccatcaag
gttttggacattgatgataatagtcctgtgttcaccaattcaacgtacactgtccttgtt
gaggagaatctgccagctgggaccaccatccttcaaatagaggccaaagatgtcgacctt
ggagcaaatgtgtcttaccggataagaagcccagaagtaaagcatttttttgcactacat
ccatttacaggagaactatcccttttaaggagtttagattatgaggcatttccagaccaa
gaagcaagtatcacttttctggtagaggcctttgatatttatgggacaatgcctcctggt
attgctactgtcacagtgattgtaaaggatatgaatgattatcctcctgtctttagtaaa
cgaatatacaaagggatggtggctccagatgcagtcaagggtacacctatcacaacagtt
tatgctgaagatgcagaccctcctggattacctgcaagtcgtgtgaggtatagagtagat
gatgtccagtttccttaccctgccagtatttttgatgtggaagaagattctggaagagta
gtaacacgagtcaatcttaatgaagaacctacaacaatttttaagttggtggtggttgct
tttgatgatggggagcctgtgatgtccagcagtgccacagtgaagattcttgtcttacat
cctggtgagatcccacgcttcacacaggaggaatatagacctcctccagtaagtgaactt
gccaccaaaggaaccatggttggtgtaatttctgctgctgccattaatcaaagtattgtg
tactccattgtttcaggaaatgaagaagatacatttggaattaataacatcacaggtgtt
atctatgtgaatggacctctggattatgagaccaggacaagctatgttcttcgagtccaa
gctgattccctggaagtggtccttgccaatctccgagttccttcaaaaagcaatacagct
aaagtatacattgagattcaggatgaaaataatcatcccccagtgtttcagaaaaaattc
tacatcggaggtgtatctgaagatgcaagaatgtttacttctgtactcagagtgaaggct
actgataaagatacgggcaattatagtgtcatggcctacagactcataataccaccaatt
aaagagggaaaagaaggatttgtagtggaaacatatacagggcttatcaaaactgctatg
ctcttccataatatgaggagatcctacttcaagtttcaagttattgcaactgacgactat
gggaagggactgagtggcaaagccgatgtacttgtctctgtggtcaatcagctggatatg
caagtcattgtttccaatgtgcctcctactctagtggaaaaaaagatagaagatctaaca
gagatcttggatcgctatgttcaggaacaaattcctggtgccaaggttgtagtggagtcc
attggtgctcgccgacatggagatgccttttccctagaagactacaccaaatgtgacttg
actgtctatgcaatcgacccccaaaccaacagagccatcgatagaaatgagctttttaaa
tttttggatggcaaactgcttgatatcaataaagactttcagccgtattatggggaagga
ggacgcattctggagatccggactccagaggcagtgaccagcattaaaaagagaggagag
agtctaggatacacagaaggggccttgttggctctggccttcatcatcatcctctgctgc
attcctgccatcttggtggttttggtcagctacagacagtttaaagtacgtcaagctgag
tgcacaaagactgcacgaattcaggccgcgttacccgcggctaaaccagcagcgccggcc
cctgcaccagtggcagcgcccccgccgccgccgccgcctccaccaggtgcgcatctctat
gaagaacttggagacagctcaatgtatgaaatgcctcaatatgggagtcgccgtcgattg
ttaccaccagctggacaagaggaatatggtgaggtggttggtgaagctgaggaagaatat
gaggaggaagagtgggcaagaaaaagaatgatcaagttagttgtagatcgagagtatgaa
accagctcaactggagaagacagcgctcctgaatgtcagagacaccgtcttcaccatcct
agtatccacagtaatatcaatggcaatatatatatcgcacagaatggttctgtggtgaga
acccgccgtgcctgcctcacggacaacttaaaagttgcttcccctgttcgattgggaagg
cactttaagaaactagacaagttggcagtgacacatgaggagaatgtgcctctgaacaca
ttatcaaaggggccattttctactgagaaaatgaatgcaagaccaactctggttacattt
gcgccttgccctgtggggactgacaatacagcggtgaagacactagggaacaggctgaaa
agcacagttgaacaggagtccatgattgacagtaagaacatcaaggaggctttggaattt
catagtgaccacacacagtccgatgatgaagagctttggatgggtccctggaataacctc
catataccaatgacaaaactgtga
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integrated database retrieval system