Pandoraea sp. XJJ-1: OYT13_17955
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Entry
OYT13_17955 CDS
T10414
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx01501
beta-Lactam resistance
panx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OYT13_17955
01503 Cationic antimicrobial peptide (CAMP) resistance
OYT13_17955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
panx03036
]
OYT13_17955
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panx02000
]
OYT13_17955
01504 Antimicrobial resistance genes [BR:
panx01504
]
OYT13_17955
Chromosome and associated proteins [BR:
panx03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OYT13_17955
Transporters [BR:
panx02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OYT13_17955
Antimicrobial resistance genes [BR:
panx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OYT13_17955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
DUF1344
RibLong
Phytase-like
FlgT_C
Motif
Other DBs
NCBI-ProteinID:
WAL81708
UniProt:
A0A9E9DA59
LinkDB
All DBs
Position
complement(3893110..3894321)
Genome browser
AA seq
403 aa
AA seq
DB search
MHVKRSSLGMVTAVALAVLALAACGKKPPPPQAMVPEVGVVTLQSQNVTLTTDLPGRTSP
FRVADVRARVDGIVLKRDFTEGGDVKAGQRLYKIDPATYQAAYENAKATLAKAVANQAST
KLLADRYKQLVAVEAVSKQDYDNAVAASLQADAEVQAGKAAVDTAKINLGYTDVPAPISG
RTGLSQVTEGAYVQAGAATLMTTVQQIDPMYVDVTQSAAQGLRLRRALAEGKLQSAGKNA
AKVELTLEDGTTYPLEGKLQFSDITVDQTTGSVTVRAIFPNPNRELLPGMFVHAKLQEGV
KEGGLLVPQQGVTRDQKGQPTALIVNKEGKVELRQLVTDRAIGNMWLVSAGLAAGDQVIV
SGLQKVRPGAPAKAVPAQLPGAEAPAGASAPAAAAPASGAKAQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcaagagaagttcactggggatggtcactgccgtcgcactcgcggtgttggcc
ttggcagcatgcggcaagaagccgccgccgccgcaggccatggtgccggaagtcggcgtc
gtgacgctgcaatcccagaacgtaacgctgacgaccgacctgcccggacgcacctcgccc
ttccgcgtggccgatgttcgcgcgcgcgtcgacggcatcgtgctcaagcgcgatttcacc
gaaggcggtgacgtcaaggcgggccagcgtctgtacaagatcgatccggccacgtatcag
gccgcgtatgaaaacgccaaggcaacgctggcgaaggccgtggcgaatcaggcgtcgacg
aaactgctggccgatcgctacaagcaactcgtggccgtcgaggcggtgtccaagcaggat
tacgacaacgccgttgccgcatcgctgcaagccgacgccgaagtgcaggccggcaaggcg
gccgtcgacacggcgaagatcaacctcggctacaccgacgtgccggcgccgatttcgggc
cgcacagggttgtcgcaggtcacggaaggcgcctacgtgcaggcaggggccgccacgctg
atgacgaccgttcagcagatcgatccgatgtatgtggacgtgacgcaatcggcggcgcaa
gggttgcgcctgcgtcgtgcgctggccgagggcaagctgcaaagcgcgggcaagaacgcc
gccaaggtggaactgaccctggaagacggcacgacgtacccgctcgaaggcaagctgcag
ttctccgacattaccgtcgatcagacgaccggctcggtgaccgtgcgtgccatcttcccg
aacccgaaccgcgagttgttgcccggcatgttcgtgcacgcgaagctgcaggaaggcgtg
aaggagggcggtctgctcgtgccgcagcagggggtcacgcgtgatcagaagggccagccg
acggcactgatcgtgaacaaggaaggcaaggtcgagttgcgtcagcttgtcaccgatcgc
gcgatcggcaacatgtggctggtgagtgcgggtctggccgccggcgatcaggtgatcgtg
tcgggtcttcaaaaggtgcgcccgggcgcgccggcgaaggcggttccggcgcagttgccg
ggggctgaggcgcctgcaggtgccagtgcaccggcagcggccgcccccgcctcgggcgcc
aaagctcaataa
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