Pandoraea sp. XJJ-1: OYT13_18545
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Entry
OYT13_18545 CDS
T10414
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18095
multidrug efflux pump
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx01501
beta-Lactam resistance
panx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OYT13_18545
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OYT13_18545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panx02000
]
OYT13_18545
01504 Antimicrobial resistance genes [BR:
panx01504
]
OYT13_18545
Transporters [BR:
panx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OYT13_18545
Antimicrobial resistance genes [BR:
panx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
OYT13_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Germane
Motif
Other DBs
NCBI-ProteinID:
WAL81807
UniProt:
A0A9E9I8Q0
LinkDB
All DBs
Position
complement(4018302..4021439)
Genome browser
AA seq
1045 aa
AA seq
DB search
MARFFIDRPVFAWVIALLITLVGVLAIRALPVAQYPDIAPPTVSVWSSYPGASAKVVEDA
VTAIIERQMNGAPGLMYTSASSGNGRSSVNLTFRQGTNLDLAAVEVQNRLKTVESRLPEV
VRRDGVVVERAADNIHMVVTLASANPAIGESDLGEIAAAQVINQLKRVPGVGQVQFWGTE
KAIRIWPDTAKLVALDLSASDIVSKIRAYNVRVTVGDIGAGSTPASAPINANVVSEGSLS
SPEAFAGIPLRVRADGSAIRLGDVARVELGAADYAYSSRVDGMPATAMGIKLAAGSNAVA
VMKAVRKVMDEQSALFPAGVSYQIPYETASFVKVSIQKVVKTLLEAVVLVFLVMYLFMQN
LRATLIPTLVVPVALLGTFGVLLGLGYSINTLTMFGMVLAIGILVDDAIVVVENTERIMV
EEGLSPYAATVKAMKQISGAIVGITVVLVAVFVPMAFFPGAVGNIYRQFAITLAVSIAFS
AFLALSLTPALCATLLRPIAAGHHDKRGFFGWFNRTFALGTERYTRTVSKTLRRPWRAVL
VYGAVLIAVPLAFMRLPSSFIPDEDTGSFMVMASEPQGATLPEAMSALERIEQYLMRHEP
VKHVFALGGWNEFGSGPGGGMLFVTLKDWHERTSAHDEVSAIVERVNAKFGGRPDRMVMA
MNSPALPELGSSNGFNLRLQDRAGVGKDALTAARDALLKKAAQDPVLRNVIFAGQGDVPQ
IDVAIDRHKMEALGVKMDDVNTTLATMFGSDYVGDFMLGAESRRVIVQADGRQRVSPEDV
GNLRVRNANGEMVPLSAFVSLKWKLGSPQLRRYNGYPSFTIQGESAPGKSSGEAMVRMER
LMADLPQGIGYEWSGQSLEERISGAQAPVLFALSVLVVFLALAALYESWAIPAAVVMVVP
LGVIGALGAVSLLGMPNDIYFKVGLIATIGLSAKNAILIVEVANDMTKQGMAWLDAAVEA
ARLRLRPIVMTSLAFGFGVVPLAIASGPASGAQRAIGVAVLGGIVTATVLAIFLVPLFFL
WAGRFVRRPKTNASGDAAPAIEGKV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttctttatcgatcgcccggtctttgcctgggtgatcgccctgttgattacg
ctcgtcggcgtgctcgcgatccgggcgctccccgttgcgcaataccccgacatcgccccg
ccgacggtcagtgtctggagcagctatccgggcgcgtcggccaaggtggtcgaagacgcc
gtgacggcgatcatcgagcgccagatgaacggcgcgccggggctgatgtatacgtcggcg
tccagcggcaatggtcgttcgtcggtcaatctcaccttccggcagggcaccaatctcgat
ctggccgccgtcgaggtgcaaaaccgcttgaagacggtcgaatcgcgtctgcctgaagtc
gtgcgccgcgatggcgtcgtggtcgagcgcgcggccgacaatattcatatggtggtcacg
ctggcgtccgcgaatccggcgattggcgaatccgatctcggcgagatcgccgcggcgcag
gtcatcaaccagctcaaacgcgtgccgggcgtcggacaggtgcagttctggggcacggag
aaggcgattcgtatctggcccgacacagcgaagctcgtcgccctcgacctgagtgcttcg
gacatcgtctcaaagatccgggcctacaacgtgcgcgtaaccgtcggtgatatcggcgca
ggctcgacgcccgcgtcggccccgatcaacgccaacgtggtgtcggaaggctcgctttcc
tcccccgaagcctttgccgggattccgttgcgcgtgcgtgccgacggctcggcgatccgg
ctcggcgatgtcgctcgcgtggaattgggggcggccgattacgcctattcgtcgcgcgtg
gacggcatgccggccaccgcgatgggcatcaagctggccgccggctcgaatgccgtcgcg
gtgatgaaggcggtgcgcaaggtgatggacgaacaatcggcgctgtttccggccggtgtt
tcgtaccaaattccgtacgagaccgcgtcgttcgtcaaggtttcgatccagaaggtcgtg
aagacgttgctcgaagccgtggtgctggtgttcctggtgatgtacctgttcatgcagaac
ctgcgcgccacgctcattcccacactggtggtgccggtcgcgctgctcggcaccttcggc
gtgctgctgggactcggctattcgatcaacacgctcacgatgttcggcatggtgctggcc
atcggcattctcgtcgacgacgcgatcgtcgtcgtggagaacaccgaacgcatcatggtg
gaagagggactctcgccctatgccgccacggtcaaggcgatgaagcagatcagcggggcc
atcgtggggatcacggtggtgctggtcgcggtgttcgtgccaatggcgtttttccccggt
gcggtgggcaacatctaccgtcagtttgcaatcacgctcgcggtgtcgattgccttctcg
gcgttccttgccctctcgctcacgcccgcgctgtgcgccacgctgctgcgtccaatcgcg
gccggccatcacgacaaacgcggtttcttcggttggttcaatcggacttttgcgctgggt
accgagcgctacacacggaccgtaagcaagacgttgcgccgtccgtggcgcgcggtgctg
gtgtatggcgcggtgctgatcgccgtgccgctcgcgttcatgcgtctgccctcgtcgttc
attcccgacgaggacaccggcagcttcatggtgatggcgtccgagccgcagggcgccacg
ttgcccgaggcgatgtcggcgctcgagcgcatcgagcaatacctgatgcggcacgagccg
gtcaaacacgtctttgcgctgggcggatggaacgagttcggttcgggcccgggcggcggc
atgctgtttgtcacgctcaaggactggcacgaacgcacatctgcacacgacgaggtgagc
gccattgtcgagcgcgtcaacgccaagtttggcggtcggcccgatcgcatggtgatggcg
atgaacagcccggcgctgccggaactgggttcgtcgaacggcttcaatctgcgcttgcag
gaccgggccggtgtgggtaaggacgcgctcaccgccgcgcgcgatgcgctgctcaagaag
gcggcgcaagatcctgtgctcaggaacgtgatctttgccggtcagggcgacgtgcctcaa
atcgacgtcgccatcgaccggcacaagatggaagcgctcggcgtcaagatggacgacgtc
aatacgacgctcgcgacgatgttcggctccgactatgtcggcgacttcatgctgggcgcg
gagagtcgccgcgtgatcgtgcaagcggacggacgtcagcgcgtgtcgccggaggacgtc
ggcaatctgcgcgtgcgcaacgcgaatggcgaaatggtgccgctttcggcattcgtctcg
ctcaagtggaaactcggctcgccgcagctcaggcgatacaacggttacccctcgttcacg
atccagggcgaatcggcaccgggcaagagcagcggcgaggcgatggtgcgcatggagcga
ctgatggccgacctgccccagggcatcggttacgagtggagcggccagtcgctcgaggag
cgcatctcgggcgcacaggcgccggtgctgttcgccttgtcggtgctggtcgtgttcctc
gcgctcgcggcgttgtacgaaagttgggcaattccggcggccgtcgtcatggtggtgccg
ctcggtgtgatcggggcgctcggcgcggtgagcttgctgggcatgcccaacgacatctac
ttcaaggtggggttgattgcgaccatcggcctgtcggcgaagaacgccatcctgatcgtg
gaagtcgccaacgatatgacgaaacagggcatggcctggctcgatgcggcggtcgaagcc
gcgcgtttgcgcctgcgcccgatcgtgatgacgtcgctggcgttcggcttcggcgtggtg
ccgctggccattgcctcgggcccggcgtcgggcgcgcagcgcgccatcggtgtggcggtg
ctcggcgggatcgtgacggccacggtgctggcgatcttcctggtgccattgtttttcctg
tgggccggccgcttcgtgcgccggccaaagacgaatgcgtcgggcgatgccgcaccggct
atcgaggggaaggtatga
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