Pantoea sp. SOD02: NR302_15255
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Entry
NR302_15255 CDS
T10895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
panz Pantoea sp. SOD02
Pathway
panz01501
beta-Lactam resistance
panz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR302_15255
01503 Cationic antimicrobial peptide (CAMP) resistance
NR302_15255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
panz03036
]
NR302_15255
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panz02000
]
NR302_15255
01504 Antimicrobial resistance genes [BR:
panz01504
]
NR302_15255
Chromosome and associated proteins [BR:
panz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NR302_15255
Transporters [BR:
panz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NR302_15255
Antimicrobial resistance genes [BR:
panz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NR302_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CusB
BSH_CzcB
Beta-barrel_RND_2
Biotin_lipoyl
CzcB_C
HH_EMRA
BSH_YknX
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UVC28590
LinkDB
All DBs
Position
complement(3288363..3289499)
Genome browser
AA seq
378 aa
AA seq
DB search
MRLKLLSASVVFLLAACDQGGAKPAASATPQVGVVNLKAEPVTLVTQLPGRTTAVRTAQV
RPQVSGVIEKILFTEGGEVKAGQPLYQIDPATYKAAYDKAMATWQNDAMVVKRYQPLANA
HAISQQTYDDAVAAAREAQADVETAKVNLDYTLVKAPISGHISRSLYTAGALVTNGQTDY
LATITQLDPIYVDVSESSTDLLRLRRALAEGKIAKVADNTAAVGLSLEDNSQYAEQGKLA
FSEVNVDTATGTVVLRAVFPNPNNELLPGMYVHASFPQGIQQQGILLPQESIMHDTKGQP
YVYVVKSDNTIEQRSINTGEMIKGEWLVTSGLQQGENVVVNNLQSVRSGVKVTTTAANTN
DTPSANAVSLSMTDAAAQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaaacttctttctgccagcgtggtgtttttactggcagcctgtgaccagggc
ggagcaaagcccgccgcatccgccaccccgcaagtgggcgtggtcaacctgaaagcggaa
cccgttacgctcgttacccaattaccaggccggaccacggcggtgagaaccgcgcaggtg
cgtccgcaggtgagcggcgtgattgaaaaaatcctgttcactgagggcggtgaagtgaaa
gccggccagccgctgtatcaaatcgatccggccacctacaaagcggcctacgacaaagcg
atggcgacctggcagaacgatgcgatggtggtgaagcgctatcagccgctggccaacgcg
cacgccatcagtcagcaaacttacgacgatgcggtcgccgccgcgcgtgaagcgcaggcc
gatgtggaaaccgccaaggtgaatctcgattatacgctggtgaaagcgccgatttccggc
cacatcagccgctcgctgtataccgctggtgcgctggtcaccaatgggcaaaccgattat
ctcgccactatcactcagcttgatccgatctatgttgatgtcagcgaatcgtccaccgac
ttgctgcgtctgcgccgcgcgttggcggaaggcaagattgccaaagtggccgacaacacc
gccgccgttggcctgtcgctggaagataacagccagtacgccgagcagggcaagctggca
ttctcggaagtcaacgtcgataccgccaccggcaccgtggtgctgcgcgcggtgttcccg
aaccctaataacgaattacttcccggcatgtacgtgcacgccagcttcccgcagggcatt
cagcagcaaggcattttgctgccgcaagagtcaatcatgcatgacaccaaaggtcagccg
tatgtctatgtggtgaaaagcgacaacaccattgagcagcgcagcatcaacaccggcgag
atgatcaaaggcgaatggctggtaacgtcgggcctgcagcaaggggaaaacgtggtggtg
aacaacctgcaaagcgtgcgcagcggggtgaaagtcaccaccaccgccgccaacaccaat
gacacgccatccgctaatgcggtgagtctttcgatgactgacgcagcagcgcaataa
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