Pantoea sp. At-9b: Pat9b_1115
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Entry
Pat9b_1115 CDS
T01386
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao00020
Citrate cycle (TCA cycle)
pao00785
Lipoic acid metabolism
pao01100
Metabolic pathways
pao01110
Biosynthesis of secondary metabolites
pao01120
Microbial metabolism in diverse environments
pao01200
Carbon metabolism
pao01210
2-Oxocarboxylic acid metabolism
Module
pao_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pao_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pat9b_1115
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Pat9b_1115
Enzymes [BR:
pao01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Pat9b_1115
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
ADU68437
UniProt:
E6WC21
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All DBs
Position
1254611..1257418
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AA seq
935 aa
AA seq
DB search
MQNSAMKPWLDSSWLAGANQSYIEQLYEDFLTDPDSVDAVWRDMFQQLPGTGVKPEQFHS
TTRDYFRRLAKDATRYTSTVTDPAANSKQVKVLQLINAFRFRGHQHANLDPLGLWKQDAV
PDLDPVYHDLTDADFQESFNVGSFAIGKETMKLADLYEALKQTYCGSIGAEYMHITNTDE
KRWIQQRIESVVGHATFSTEEKKGFLKELTAAEGLEKYLGAKFPGAKRFSLEGGDALVPM
LREMIRHAGKSGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFSGKHKEHLGTGDVKYH
MGFSSDVETEGGLVHLALAFNPSHLEIVSPVVMGSVRARLDRLAEPSSNKVLPITIHGDA
AVTGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAP
IFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIK
KHPTPRKIYADRLEADGIAKLEDATEMVNLYRDALDAGECVVPEWRPMSLHSFTWSPYLN
HDWDESYPATVEMKRLQELARRISQVPEAVEVQARVAKIYNDRKEMAEGNKAFDWGGAEN
LAYATLVDEGIPVRLSGEDSGRGTFFHRHAVVHNQANGSTYTPLHHIHHGQGQFKVWDSV
LSEEAVLAFEYGYATAEPRVLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLIVMSP
KSLLRHPLAISTLDELANGSFQPAIGEIDALDAKQVKRVVMCSGKVYYDLLEQRRKNEKN
DVAIIRIEQLYPFPHKAVQEALKAYAHVQDFVWCQEEPLNQGAWYCSQHHFREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNLG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagcgcgatgaagccctggctggactcctcctggctggccggcgcgaaccaa
tcttacatagagcaactctatgaggatttcctgaccgatcctgactctgttgatgcagtg
tggcgcgacatgttccaacagctgcctggcaccggcgtgaaacctgagcagtttcactcc
accacgcgcgattacttccgccgcctggctaaagacgcaacgcgttacacttccacagtc
actgatccggccgctaactctaaacaggttaaggtgctgcagctgatcaacgccttccgc
tttcgcggacaccagcacgctaaccttgatccactcggcctgtggaagcaggacgccgta
ccggatctcgacccggtatatcacgacctgaccgacgccgattttcaggaaagctttaac
gtaggttcttttgctatcggcaaagaaaccatgaagctggccgatctctatgaagcgctg
aaacagacctactgtggctccatcggtgccgaatacatgcacatcaccaataccgacgaa
aaacgctggattcagcagcgcattgaatcggtggtgggacacgcgacattcagcactgaa
gagaaaaaaggtttcctgaaagagctgaccgcggcagaagggttggaaaaatacctcggc
gcgaaattccctggtgcgaaacgcttctcgctggaagggggtgatgcgctggtaccgatg
ctgcgtgagatgatccgccatgccggtaaaagcggcacccgcgaagtggtgctgggtatg
gcgcaccgtggtcgtctgaacgtactgatcaacgtactgggcaaaaagccacaggatctg
ttcgacgagttctccggtaaacataaagaacatctcggcaccggtgacgtgaagtaccat
atgggcttctcgtcagacgtggaaaccgaaggcggtctggtgcacctggcgctggcgttt
aacccgtcgcacctggaaatcgttagcccggtggtaatgggttcagtgcgtgcgcgtctc
gatcgtctggcggaaccgagcagcaataaagtgctgccgatcaccattcacggtgatgca
gcggtaaccggtcagggcgtggtgcaggaaaccctgaacatgtcgcaggcacgcggttac
gaagtgggcggaacggttcgcatcgtgatcaacaaccaggtgggcttcaccacctcgaat
ccgctggatgcccgctcaacgccgtactgtactgatatcggtaaaatggtgcaggccccg
attttccacgttaacgcggacgatccggaagccgttgcctttgttacccgtctggcgctc
gactatcgcaacaccttcaaacgtgatgtgtttatcgacctggtgtgctaccgccgtcat
ggccataacgaagccgacgagccaagcgccacccagccgctgatgtaccagaaaatcaaa
aagcatccgacgccgcgtaaaatttacgctgaccgtctggaagccgatggcattgcgaaa
ctggaagatgccaccgagatggtcaacctgtaccgcgatgcactggatgccggtgaatgc
gtggtgccggaatggcgtccgatgagtctgcactcctttacctggtcaccgtatctcaac
cacgactgggatgagagctatccggcgactgtggaaatgaaacgtttgcaggaactggct
cgccgtatcagccaggtaccggaagcggttgaagtccaggcgcgtgtcgccaagatttac
aacgatcgtaaagagatggccgaaggcaacaaagcctttgactggggcggcgcggaaaac
ctcgcttacgccacgctggtcgatgaaggcatcccggtccgtctgtcaggtgaagactct
ggccgtggcaccttcttccaccgtcatgcggtggtgcacaaccaggcgaacggttcaacc
tatacgccgttgcaccatatccatcatggtcagggccagttcaaagtctgggactcggtg
ttgtctgaagaagcggtgctggccttcgaatacggttatgccaccgcagaaccccgcgtg
ctgaccatctgggaagcgcagttcggtgactttgccaacggtgcacaggtggtgatcgac
cagttcatcagctctggcgagcagaagtggggccgtatgtgtggcctggtgatgctgctg
ccgcacggttacgaaggtcaaggcccggagcactcctccgcccgtctggagcgctatctg
caactctgtgctgaacagaatatgcaggtgtgtgtgccgtctacgccggcgcaggtttac
catatgctgcgtcgtcaggcgctgcgcggtatgcgtcgtccgttgatcgtgatgtcaccg
aagtcgctgctgcgtcatccgctggcgatttccaccctcgacgaactggctaacggtagc
ttccagcccgcgatcggcgagatcgatgcgcttgatgcgaaacaggtaaaacgcgtcgtg
atgtgttctggtaaggtttattacgacctgctggaacaacgtcgtaagaatgagaagaac
gacgtcgcgattattcgtattgagcagctgtacccgttcccgcataaagcggtacaggaa
gcattaaaagcttatgcccatgtgcaggattttgtctggtgtcaggaagaaccgctgaat
cagggcgcatggtactgcagtcagcatcatttccgcgaagtgattccgtttggtgcgtca
ctgcgttatgcaggccgtccggcttctgcttcaccggccgtgggctacatgtccgtacat
caaaaacagcagcaagacctggttaacgacgcgctgaaccttggttaa
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