Pantoea sp. At-9b: Pat9b_1296
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Entry
Pat9b_1296 CDS
T01386
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_1296
Enzymes [BR:
pao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Pat9b_1296
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pat9b_1296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_ANTKMT
Methyltransf_12
Methyltransf_32
Methyltransf_11
UPF0020
Methyltransf_4
TRM5-TYW2_MTfase
TehB
Corona_NS1
Motif
Other DBs
NCBI-ProteinID:
ADU68617
LinkDB
All DBs
Position
1450175..1451299
Genome browser
AA seq
374 aa
AA seq
DB search
MHCALYDADRCRSCQWLEKPYPQQLSEKQSLLEQLLAQQTVGEWRTPVTSEEQGFRNKAK
MVVSGSVERPVFGMMSRAGEPIDLCACPLYPASFAAVFAVLKPFIARAGLTPYNVARKRG
ELKFLLLTESTQGGMMLRFVLRSDSKLAQLRAALPWLQQQLPQLTVISANIQPVHMAILE
GDEEIALTPDQALAERFNHVPLYIRPQSFFQTNPQVAASLYATARDWVAQLGVSSMWDLF
CGVGGFGLHCASAEMQLTGIEINAEAIACARQSAQQLGLENVSFAALDSTQFATARDQVP
ELVLVNPPRRGIGTELCAYLSQMAPAYILYSSCNPHSMAQDIARLSAYDVSRVQLFDMFP
HTAHFEVLTLLTKR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcgctttatgatgccgaccgctgccgttcctgccagtggctggaaaaacct
tatccacagcagcttagcgagaaacagtcgctgttggagcaactgctggcgcagcagacg
gtgggggagtggcgcacgccggtaacctctgaggaacaggggttccgtaacaaagccaaa
atggtggtgagcggtagcgtcgagcgtccggtgttcggcatgatgtcgcgcgcgggcgag
ccgatcgatctgtgcgcttgtccactctatcccgccagttttgccgcggtgtttgctgtc
ctcaaaccctttatcgcccgtgcgggtttaacgccgtataacgtggcacgcaaacgcggt
gagctgaaatttctgttactgacggaaagcacgcagggcggcatgatgctgcgttttgtg
ttgcgttccgacagcaaactggcgcagctacgtgccgccctgccgtggctgcaacagcaa
ctgccgcagttgacggtgatctctgccaacattcagccggtgcatatggcgatcctcgaa
ggtgatgaggagattgccttaacgccagatcaggcgctggcggaaaggtttaaccatgtc
ccgctgtatattcgtccgcaaagtttcttccagaccaatccgcaggtggcggccagtttg
tacgcgacggcacgcgactgggtggcgcagttgggggtgagcagcatgtgggacctgttt
tgcggtgtcggcggctttggcttgcactgcgccagcgctgagatgcagctgaccgggatt
gagatcaacgcggaagcgatcgcttgtgcccgccagtcagcacagcaactggggctggag
aatgtgagttttgccgctctcgattccacgcagttcgccaccgcgcgtgatcaggtgcct
gaactggtgctggttaatccgccacgtcgcgggattgggactgagttatgtgcttatctc
agccagatggctccggcctacattctgtattccagctgtaatccgcacagcatggcgcag
gatattgcgcgcctgagcgcttatgacgttagccgtgtgcagctgttcgatatgttcccg
cataccgcccattttgaagtgctgaccttactgactaagcgctga
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