Pantoea sp. At-9b: Pat9b_1838
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Entry
Pat9b_1838 CDS
T01386
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pao
Pantoea sp. At-9b
Pathway
pao01501
beta-Lactam resistance
pao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pat9b_1838
01503 Cationic antimicrobial peptide (CAMP) resistance
Pat9b_1838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pao03036
]
Pat9b_1838
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_1838
01504 Antimicrobial resistance genes [BR:
pao01504
]
Pat9b_1838
Chromosome and associated proteins [BR:
pao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Pat9b_1838
Transporters [BR:
pao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Pat9b_1838
Antimicrobial resistance genes [BR:
pao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Pat9b_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
YknX_C
BSH_YhbJ
DUF7507
BSH_YknX
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ADU69154
LinkDB
All DBs
Position
2034807..2035967
Genome browser
AA seq
386 aa
AA seq
DB search
MMVFQRYVIAGLAFLIVACDQSAENNPGAMVTEVGVTTLQTQPVTITSQLTGRVTGTMTS
DVRPQVGGIIQKRLFTEGDEVKAGQVLYQIDPASYQASYDEAVGQLKNAVAVVKSSKLKA
ERYAALVKENGVSRQDADDAEATYQQNLASVTQYKAAVESARINLNYTQIKAPISGRIGI
SSVTPGALVTSEQTTALATIRALDPIYVDLTQSSVQLLKLKRQQASLHQNPDEVPVTVQL
EDGSTYDRTGKLELTEVSVDESTGTVTLRAIFPNPDHQLLPGMYVRATVSNGVKNDGLLA
PQQGITRDAKGNATALVVDKDNKVESRAVVTDRVIGNKWLIDSGLQSGDKLIVEGTGKVQ
PGQTVKAVETGTTTPTDASANTSGGN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttttcagcggtatgttattgcaggtctggcatttttgattgtcgcctgtgac
cagagtgcagagaacaaccccggggcaatggtcacggaagttggcgtaacaacgctccaa
acgcagccggttaccataaccagtcaactgacaggacgtgttaccggcaccatgacatcg
gatgtgcgtcctcaggtcggcggcattatccagaagcgtctgtttaccgagggtgatgag
gttaaagccggtcaggttctttatcagatcgatcctgccagttatcaggccagttatgac
gaagcggtcggacagctaaaaaatgccgtcgccgtggttaaaagcagcaaactgaaagcc
gaacgctatgcggcgctggtgaaagaaaacggcgtttcccgtcaggatgctgacgatgcg
gaagccacttaccagcaaaacctggcgtcagtgacgcagtataaagcggcggttgagagc
gcccgcatcaacctgaattacacgcaaattaaagcgcccatcagtggccgcattggtatt
tcatccgtgacgccaggcgcgctggtgacgtcagagcagaccactgcgctggcgaccatt
cgtgcgctggacccgatctatgtcgatctgacgcagtccagcgtgcaattgctgaaactt
aaacgtcagcaggcctcgctgcaccaaaaccctgacgaagtgccggtaacggtgcaactg
gaagacggttcaacctacgatcgcaccggtaagctggaactgacggaagtgtcagtggat
gaatcaaccggtaccgtcaccttgcgggctattttccccaacccggatcaccaattgttg
ccaggcatgtatgtgcgcgccacggtcagcaacggtgtgaaaaatgatgggctgttggca
ccgcagcaaggcattacccgcgatgcgaaaggcaatgcgactgcgctggtggtggataaa
gacaacaaagtggaaagccgtgcggtagtgaccgatcgggtgattggcaacaaatggctg
atcgacagcggtctgcaaagcggcgataaactgattgttgaaggaaccggtaaagtacag
ccggggcagaccgtgaaagcggttgaaacaggcaccactacgccgactgatgccagcgcg
aacaccagcggagggaactga
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