Pantoea sp. At-9b: Pat9b_4233
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Entry
Pat9b_4233 CDS
T01386
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pao
Pantoea sp. At-9b
Pathway
pao01501
beta-Lactam resistance
pao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pat9b_4233
01503 Cationic antimicrobial peptide (CAMP) resistance
Pat9b_4233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pao03036
]
Pat9b_4233
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_4233
01504 Antimicrobial resistance genes [BR:
pao01504
]
Pat9b_4233
Chromosome and associated proteins [BR:
pao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Pat9b_4233
Transporters [BR:
pao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Pat9b_4233
Antimicrobial resistance genes [BR:
pao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Pat9b_4233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ADU72797
UniProt:
E6WN12
LinkDB
All DBs
Position
pPAT9B04:complement(109169..110329)
Genome browser
AA seq
386 aa
AA seq
DB search
MPHNVALKPLALLCAFVILNLTGCDDSTGQAAQAQSAPEVQVQTLTTQSLPVSTELPGRT
SAYRVAEVRPQVSGIILKRAFTEGSDVVAGQTLYQIDPAPFRASYNNARAAVNEAEANAR
MAQVTLNRYRSLTGTHYISRQDYDQAQATAAQTRAAVDAANAALDTARINLAWSTITSPI
SGRIGRSSVTEGALVQDAQSDALATVQQLDPLYVDVTQSSQDFLRLQQELASGRLHQNAG
KALVSVILGDGSVYPHNGTLAFSDVTVDQTTGSITLRAIVPNPDHALLPGMFVRARLDEG
TDPNALLIPQQAVTRTPRGDATALVVGSDNKVEVRTINVSQTAGDKWRVTGGLQSGERVI
VSGVQRAQPGMTVTPITASTSTGNAD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccccataacgtggcacttaagcctctggctttgctatgcgcgttcgtcattttaaat
ttaacaggatgtgatgattcaacaggccaggccgctcaggcgcagagtgcgcccgaggtg
caggtccagaccctgacaacccagtcactccccgtgtccactgaactccccggacgcacc
tcagcctatcgtgtggctgaagttcgcccgcaggtttccggcattattttaaaacgcgcc
ttcaccgaaggcagtgacgtggttgccggtcagacgctgtaccagatcgatccggccccc
ttccgcgccagctacaacaatgcccgggcagccgtgaatgaagcagaagccaacgcgcgc
atggcgcaggttaccctgaatcgctatcgctcgctgaccgggacacattacatcagccgt
caggattatgatcaggcgcaggcgacagcagctcagacacgcgcggcggtggatgccgcc
aatgccgcgctggatacggctcgcatcaacctcgcctggagcaccatcacctcgcccatc
agtgggcgtattggccgctcatcggtgaccgaaggcgcgctggtgcaggatgcgcaaagc
gatgcgctggcaaccgtgcaacaactggaccccctgtatgtcgatgttacccagtcgagt
caggatttcctgcgtctgcaacaggaactggcctccggtcgcctgcaccagaatgccggt
aaagcgctggtcagcgtgatcctcggcgatggctcggtctatccccataacggtacgctg
gcgttttctgatgtcaccgtcgatcagaccaccggctctatcactctgcgtgccattgtc
cctaacccggaccacgcgctgctacccggcatgtttgtgcgtgcacgactggatgaaggc
accgaccccaacgccctgctgattccgcaacaggcggtcacccgcacacctcgcggtgac
gccacggcgctggtggttggcagtgataacaaggtggaagtccgcaccatcaacgtctcg
caaaccgcaggcgacaaatggcgcgtcaccggtggtctgcaatccggtgagcgtgtgatt
gtctccggtgtccagcgcgcccagcccggtatgaccgttaccccgattactgcctctacc
tccacaggaaacgctgactga
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