Pantoea ananatis PA13: PAGR_g0114 Help Entry PAGR_g0114        CDS       T01970                                  Name (GenBank) DNA ligase YicF   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism paq  Pantoea ananatis PA13 Pathway paq03030   DNA replication paq03410   Base excision repair paq03420   Nucleotide excision repair paq03430   Mismatch repair Brite KEGG Orthology (KO) [BR:paq00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     PAGR_g0114    03410 Base excision repair     PAGR_g0114    03420 Nucleotide excision repair     PAGR_g0114    03430 Mismatch repair     PAGR_g0114  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:paq03032]     PAGR_g0114    03400 DNA repair and recombination proteins [BR:paq03400]     PAGR_g0114 Enzymes [BR:paq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      PAGR_g0114 DNA replication proteins [BR:paq03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      PAGR_g0114 DNA repair and recombination proteins [BR:paq03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      PAGR_g0114    NER (nucleotide excision repair)     GGR (global genome repair) factors      PAGR_g0114    MMR (mismatch excision repair)     DNA ligase      PAGR_g0114   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       PAGR_g0114 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_DNA_ligase DNA_ligase_aden HHH_5 RNA_ligase HHH RecR_HhH Motif Other DBs NCBI-ProteinID:  AER30655 LinkDB All DBs Position 131603..133372 Genome browser AA seq 589 aa AA seqDB search MRGMFIVGLLLIFSTFSSLAALCPAWTSARAVSEIAHLQQQLRQWDKAYFQQGRSLVSDA DYDSLQQRLNHWQRCFTQAADEYLPALPEDGTQWHPVAHTGVKKVRDKRALGYWMQARND LWVQPKIDGVAVSLIYRQGKLVSLISRGDGLHGEQWLAKARHIPAIPSVIDSQQGSIVLQ GELFLKMTGHQQAVDGGRNARARVAGAMMSQADSPLLAQLGIFIWSWPDGPASMPERLAR LSSWGFDLASHWTQPVQDEEDAASWRERWFHAPLPFVTDGIVVHQAARPAGKYWQPGEGE WAIAWKYQPPEVSSEVRSVDFSIGRTGKVAVVLNLQPVQLDDKTVRRVNIGSLKRWREQD VIAGDQVTVSLAGQGIPRLERVIWRVAQRDYPEPPGSEHFTHLSCYTLTPDCHRQLLARL SWLSQKFVLNIPGVQRSTWQRLLDTGCITHLFSWLTITPEQITAAAGISSERAQQIWHRF ELTRQQPLRRWVNALGIALPQKALRALADKEWEPLLARDVQTWQALPGVGARRAERIAAQ FQDAGLRKLITFLQQQGIPASSVFRVGIIEDGQAESKPQCQQAGKETEK NT seq 1770 nt NT seq  +upstreamnt  +downstreamnt atgagagggatgtttattgttgggctgctactgatattcagcacgttttcttcccttgcg gctttgtgccccgcctggacgtcagcgcgtgccgtcagtgagatcgcgcatttgcaacag caacttcggcagtgggataaggcgtatttccagcaagggcgctcgctggttagtgacgca gactacgatagcttgcagcagcggcttaaccactggcagcgctgttttactcaggctgcg gatgaatatttgcctgccttgcctgaggacggtacgcagtggcatcccgttgcgcacacc ggcgttaaaaaagtacgggataaacgtgcgctgggttactggatgcaggcacgaaacgat ctttgggtacaaccaaaaatcgatggcgttgccgtctctctgatctatcgacagggaaaa ctggtctcgctaatcagccgcggcgatgggttacacggcgagcagtggctggcgaaagcc cgtcatattcctgccattccatcggttatcgacagtcagcaaggcagcatcgtcctgcag ggcgagctttttttgaagatgaccggtcatcagcaggctgtggacggcggcaggaatgcc agagcccgtgtggcaggggcaatgatgagccaggctgactcgccgctgctggcacaactg ggtatttttatctggagttggcctgacgggccggcgagtatgcctgaacgtctggcccgg ttgagctcatggggctttgacctcgccagccactggactcaacccgttcaggatgaagag gatgcggcaagctggcgcgagcgctggtttcacgcgcccttgccttttgttaccgacggt attgttgtgcaccaggctgcccgcccggcaggaaagtactggcagcccggtgagggtgag tgggccatcgcctggaaataccagccaccggaggtgagcagtgaggtacgatccgtagat ttctcaataggacgaacgggaaaggtggcggtcgtactgaatcttcagcccgttcagctt gatgacaaaaccgtcaggcgtgtcaacatagggtcgttaaaacgctggcgagagcaggat gtcatcgcgggagatcaggtgacggttagcctggcaggacagggaattccccggctggag cgcgttatctggcgcgtggcgcagcgtgattaccctgagccaccgggttctgagcacttc actcatctgagttgttatacgttaacgccggattgccatcgccagttactggctcgcctg agctggctgagtcaaaagttcgtgctgaatattcccggcgttcagcgcagcacctggcag cgactactggataccggttgtattacgcacctgttttcctggctgacgattacgccagaa cagattaccgctgcagcaggcatctcctctgaaagagcacagcaaatctggcataggttc gaattgacccgccagcaacctttgcgtcgctgggttaacgcattgggcatcgcgttgccc caaaaggcacttcgcgccctggccgataaagagtgggaacccttgcttgctcgtgatgtg caaacctggcaagcgctgcccggcgtgggcgcaaggcgtgctgaacgcattgccgcacaa tttcaggatgccgggctgcggaagttgattacctttttgcagcagcagggcatcccggca tcatcagtgttcagggtggggataattgaagatgggcaagccgagtcgaaaccgcagtgc cagcaggcgggcaaagaaaccgaaaagtaa

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