Pseudemcibacter aquimaris: KW060_12500
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Entry
KW060_12500 CDS
T08836
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi01501
beta-Lactam resistance
paqi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KW060_12500
01503 Cationic antimicrobial peptide (CAMP) resistance
KW060_12500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paqi03036
]
KW060_12500
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paqi02000
]
KW060_12500
01504 Antimicrobial resistance genes [BR:
paqi01504
]
KW060_12500
Chromosome and associated proteins [BR:
paqi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KW060_12500
Transporters [BR:
paqi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KW060_12500
Antimicrobial resistance genes [BR:
paqi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KW060_12500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
BSH_CusB
HH_AAEA_pHBA
YknX_C
HH_EMRA
Beta-barrel_RND_2
HH_YBHG
HH_CyaD
Motif
Other DBs
NCBI-ProteinID:
WDU58011
LinkDB
All DBs
Position
complement(2655671..2656822)
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AA seq
383 aa
AA seq
DB search
MSRKNQIIAISVIIIAGLGWYFMKNNAAAPGGGMPMGMGQMPPPAVSVLQINTETINREE
ILPGRVAAFRQAEIRPQVEGIITERLFEEGAAVERGQALYQIDDTPYRAALASANADLVS
AEANLRAATAKEARFKELIKTNAVSGQAYDDVKAELDRATANIAVAKANIEVAQVNLNYT
KVYAPISGRIGRTMVTEGALVTTNQSDSLTQITQLDPIYIDISQPGNDALRLRSEMSNGN
DLPVQVVLDNAAGVSYEEQGVLKFSDVVVEESTGSVGLRALMPNKSQLLLPGLFVRVKIE
LGEQDALLVPQRATTRNPDGTLTVWTIDANNQVSPKMITVSGAHGDQWIVSSGLNSGDTI
VIEGYQKIGPGMTVMPSPWSPSS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagaaaaaatcaaatcattgccatttccgttatcatcattgcgggtttaggttgg
tattttatgaaaaataatgcggctgcaccaggcggtggaatgccaatgggtatggggcaa
atgccgccaccggccgtttctgtattacaaattaatactgaaaccatcaaccgtgaagaa
attcttccaggtcgtgtcgctgcctttaggcaagcggaaatcagaccgcaagttgaaggt
atcattaccgagcgcctttttgaagaaggggcggctgttgaacgcggtcaggcgctttac
caaattgatgatacgccataccgtgcggcccttgccagcgcgaatgctgatctagtgagc
gcagaagcaaacttaagagccgctacagcaaaagaagcaagatttaaagagctgatcaaa
acaaatgcggtcagtggacaagcttatgatgatgtaaaagcggaacttgaccgcgctaca
gcaaatattgcagtggcaaaagcaaacatcgaagttgcacaagtaaacttgaactacacg
aaagtatatgcgccgatttccggacgtattggccgcacaatggtgacggaaggtgcgctt
gtgacaacaaaccaaagcgacagcctgacacaaattacccagcttgacccgatatatatc
gacatcagccaaccgggtaatgacgcacttcgtttaagaagcgaaatgagcaatggtaac
gatcttccggttcaagtggtattggataatgctgcgggcgttagttatgaagaacaaggc
gttctgaaattttctgatgtagttgtggaagagagcaccggatcagtaggtcttcgggca
ctaatgccaaataaatcgcaattattgctgccggggctgtttgttcgtgtgaaaatcgaa
cttggcgaacaagacgcgcttctcgtgccgcaacgcgcaaccaccagaaacccggacggt
acattaacagtatggactattgacgcaaataatcaggtaagcccaaaaatgattaccgta
agcggtgcgcatggcgatcaatggattgtatcatccggcctaaattccggtgacacaatc
gtgattgaagggtatcagaaaatcggaccgggaatgacagtgatgccatccccatggtca
ccttcatcgtaa
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