Pectobacterium aquaticum: DMB82_0006940
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Entry
DMB82_0006940 CDS
T07653
Name
(GenBank) AMP-binding protein
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00470
D-Amino acid metabolism
paqu00552
Teichoic acid biosynthesis
paqu01100
Metabolic pathways
paqu01503
Cationic antimicrobial peptide (CAMP) resistance
paqu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DMB82_0006940
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
DMB82_0006940
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DMB82_0006940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DMB82_0006940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
paqu01504
]
DMB82_0006940
Enzymes [BR:
paqu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
DMB82_0006940
Antimicrobial resistance genes [BR:
paqu01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
DMB82_0006940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Ldh_1_C
Motif
Other DBs
NCBI-ProteinID:
UEM40706
LinkDB
All DBs
Position
1473981..1475414
Genome browser
AA seq
477 aa
AA seq
DB search
MNLHSELQELQDFLRAALLDPANPDQLAISGSDDAMTWQQLSVAVTDWSRRYQHYQQPDG
ALVVLYGHQQAEFAVAIYSCLLHNIPYIPVDCIYPQERLNEICHLASAPYYYDVATRQFI
ATGEAGQALIEQDLAYIMFTSGSTGKPKGVQIGRESLWHFMKWVRQDFSLPDVPVLMNHA
VFSFDLSLIPLLANLATGGHIVLNAKEDIAAENWLDRLKDNRVSVWVSTPSFAYQRLLSP
QFNSEYLPELNVFVFIGEVLNKALVKQLRRRFPHAKILNSYGPTEATIATTVIEITDEIL
HSENDLLPVGVMMPDSRMEITAEGELIIWGKNVMRGYLGLAKENAEKLLHRESEAFRGYR
TGDLGYENGLLYCQGRNDSQIKLNGYRIEINEIENRLLAISDISEAVVLPLMKSGGGVLR
IAAFCVTNLAPEAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDTHARTI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcactcagagcttcaggaactgcaagatttcctccgggcggcattactcgac
cccgcgaacccagatcagttggcgattagcggcagcgatgacgcgatgacctggcaacag
ctatccgtcgctgtgacagactggtcgcgtcgttatcagcactatcagcagcctgatggc
gcgctggtcgtgttatatggtcatcagcaggccgagtttgccgtggcaatctatagctgc
ctgctgcacaatattccgtatatcccggtggattgcatctatccgcaggagcggctcaac
gagatttgccatctggcgagtgcaccttattattacgatgtggcgaccagacagttcatt
gctaccggtgaagcggggcaggcgttgatcgagcaagatctcgcctatatcatgttcacc
tccggcagcactggaaagcctaaaggcgtacagatcgggcgtgaaagcctgtggcacttc
atgaagtgggtgcgccaggatttttcactgccagacgtgccggtgctgatgaaccatgcc
gtgttcagcttcgatctctctctgattccgctgctggcgaatctggctacaggggggcac
atcgttctgaatgcgaaagaggatatcgcggcagaaaattggcttgatcgcctgaaagat
aaccgcgtttccgtctgggtttcaacgccctctttcgcctaccagaggttgctgtctccc
cagttcaacagtgaatatttacctgagctcaacgtcttcgtgttcattggcgaagtgcta
aacaaagcgctggtaaaacagttacgccgccgcttcccacacgccaaaattctcaactcc
tatggcccaacggaagccactatcgcgaccaccgtcatcgaaatcaccgatgaaatcctg
cacagtgaaaacgatctgctgccggtcggcgtgatgatgccggactccagaatggaaatt
accgctgaaggtgagctgatcatttggggcaaaaatgtgatgcgtggctatttggggctc
gcgaaagagaatgcggagaaattgctgcatcgggagagcgaagcgttccggggctataga
accggcgacctaggctacgaaaatgggctactgtactgtcagggtcgcaacgatagccag
atcaaactgaatggctatcgtattgaaatcaatgagattgaaaatcgtctgctggcgata
tccgacatcagcgaagcggtagttctgccgctgatgaaatcgggcggtggtgttctgcgc
atcgccgcgttctgcgtgacgaacttagcgccagaagcgattaaaacatcgctctcgaag
gtgattccgccctacatggtgccttcccaaattattatcaaagatgcgttgccgcttaat
cctaacggcaaaatcgaccgtaagctgctggacacccatgcccgcacgatctaa
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