Pectobacterium aquaticum: DMB82_0018055
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Entry
DMB82_0018055 CDS
T07653
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00270
Cysteine and methionine metabolism
paqu00450
Selenocompound metabolism
paqu00670
One carbon pool by folate
paqu01100
Metabolic pathways
paqu01110
Biosynthesis of secondary metabolites
paqu01230
Biosynthesis of amino acids
paqu04981
Folate transport and metabolism
Module
paqu_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DMB82_0018055 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DMB82_0018055 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DMB82_0018055 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DMB82_0018055 (metH)
04980 Cobalamin transport and metabolism
DMB82_0018055 (metH)
Enzymes [BR:
paqu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
DMB82_0018055 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UEM39010
LinkDB
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Position
complement(3890950..3894633)
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AA seq
1227 aa
AA seq
DB search
MSNRVDELRRQLAQRIMVLDGGMGTMIQGYRLQEADYRGERFADWPSDVKGNNDLLVLTK
PQVISEIHDAYLEAGADILETNTFNATTIAMADYDMEALSAEINTVAAQLARASADKWTA
LTPDKPRYVAGVLGPTNRTASISPDVNDPAFRNVSFDQLVEAYRESTRALIAGGVDLIMI
ETIFDTLNAKAASFAVESEFEALGIVLPVMISGTITDASGRTLSGQTTEAFYNSLRHSRP
LSFGLNCALGPDELRQYVAELSRISECYVSAHPNAGLPNAFGEYDLDPADMAKHIGEWAR
SGFLNIVGGCCGSTPAHIAAMAKVVEGVPPRKLPEIPVACRLSGLEPLNIDANTLFVNVG
ERTNVTGSARFKRLIKEEKYNEALDVARQQVESGAQIIDINMDEGMLDAEAAMIRFLNLI
AGEPDIARVPIMIDSSKWDVVEKGLKCIQGKGIVNSISMKEGVEAFIHHAKLVRRYGAAV
VVMAFDEVGQADTRARKIEICSRAYRILTEEVGFPPEDIIFDPNIFAVATGIDEHNNYAV
DFIEACADIKAQLPHAMISGGVSNVSFSFRGNDLVREAIHAVFLYYAIRNGMDMGIVNAS
QLAIYDDLPVELRDAVEDVILNRRSDATERMLDLAEKYRGSKTEDEGSKTQAEWRGWDVK
KRLEYSLVKGITEFIELDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVVK
SARVMKQAVAYLEPYIEASKDKGSSAGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDL
GVMVPTDKILKTAREEHVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRSVGVVSALLSSTQYDDFVARTRKEYETVRIQHARKKPR
TPPVTLEAARANASDLDWDNYTPPVAHRLGVQAVTASIETLRNYIDWTPFFMTWSLAGKY
PRILEDEVVGEEAKRLFADANAMLDDLSARGALNPRGVVGLFPANRVGDDVVIYTDERRE
TVLSVSHHLRQQTEKTDFPNYCLSDFVAPKSSGKPDYLGAFAVTGGLEEDTLADLWEAQH
DDYNKIMVKAISDRLAEAFAEYLHERVRKVFWGYAPNENLSSELLIRENYQGIRPAPGYP
ACPDHTEKVQIWQLLDVEKHTGMKLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQHDQV
EDYAVRKGMSVSDVERWLAPNLGYDAD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatcgggtagacgaattgcggcgtcagttggcgcaacgcattatggtgctggat
ggtggtatgggaaccatgatccagggttatcgcctgcaggaagcagattatcgcggtgag
cgctttgctgactggccgagcgatgtgaaaggaaataacgatctgctggtgctgaccaag
ccgcaggtgattagtgaaatccatgacgcctatctggaagccggtgccgacattctcgaa
accaacaccttcaacgccaccacgattgcgatggcggactatgatatggaagccctttcg
gcggaaatcaacacggttgctgcacagctggcgcgtgccagcgctgacaaatggacggcg
ttaacgccggataagccgcgctatgttgctggtgtgcttggcccaacgaaccgcaccgcg
tcgatctcccccgatgttaacgatcccgcgtttcgtaacgtgagttttgatcaactggtg
gaagcgtatcgcgaatcgacacgcgccttgatcgcaggcggtgtcgatctgatcatgatc
gaaaccattttcgatactttgaatgctaaagcagcgagtttcgccgtcgaaagtgaattt
gaagcgctagggatcgtactgcccgtgatgatttccggcacgatcacggatgcgtcaggg
cgtacgctatccggccaaacgacggaagccttttacaactccttacgccattcccgcccg
ctttccttcggcctgaactgtgcgctggggccggatgagctgcgccagtatgtcgccgaa
ctatcacgtatttcagaatgctatgtgagcgcacacccgaatgcggggctgcctaatgcc
ttcggggaatacgatctggatccggccgatatggcaaaacatatcggcgaatgggcgcga
tccggcttcctgaatatcgtgggcggttgctgtggatcgacgcctgcgcacattgccgcg
atggcgaaagtggtggaaggcgtgccgccgcgtaagctgccagagattccggtggcctgc
cgtttatccggtctggaaccgctgaatatcgatgccaacaccctgtttgttaacgtcggg
gagcggacgaatgtcaccggctccgcacgttttaaacgtctgatcaaagaagaaaagtac
aacgaagcgctggatgtcgcccgccagcaggtggaaagcggcgcgcagatcatcgatatc
aacatggatgaaggcatgctggatgcggaagcggcgatgatccgtttcctgaatctgatt
gccggcgaacctgatatcgcccgtgtgccgatcatgattgactcctcaaaatgggatgtg
gttgagaaagggcttaaatgcattcagggcaaagggattgttaactcgatctccatgaag
gaaggcgttgaggcctttattcatcacgctaagctggtgcggcgctatggcgcagctgtg
gtagtgatggccttcgatgaagtcgggcaggcagatacccgtgcgcgtaaaattgaaatt
tgtagccgggcgtaccgcatcctgacggaagaagtcggtttcccgccggaagacattatt
ttcgacccgaacattttcgccgtggcaacgggtatcgacgagcacaacaactacgcggtg
gatttcatcgaagcctgtgcggacatcaaggcgcaactgccgcatgcgatgatctctggc
ggcgtctccaacgtgtcgttctcattccgtggtaacgatctggtccgtgaggcgatccac
gccgtcttcctgtattacgcgatccgcaatggtatggacatggggatcgtgaacgccagc
cagttggcgatctatgacgatctccctgttgaactgcgcgatgcggttgaagacgtgatc
cttaaccgtcgcagcgatgccaccgagcgcatgctcgatctggcagagaaatatcgcggc
agcaaaacggaagatgaaggcagcaaaacgcaggcggagtggcgcggctgggacgtgaag
aagcgtctggagtattcgctggttaaaggcattactgagtttatcgaactggataccgaa
gaagcacgccagcaggcgacgcggccgatcgaggtgatcgaaggcccgctgatggacggc
atgaacgtggtcggtgatctgttcggtgcaggcaaaatgtttttgccgcaggtcgtgaaa
tccgctcgcgtcatgaagcaggccgtggcctacctcgaaccctatattgaagccagtaaa
gacaaaggctcttccgctgggaaaatcctgctggcgaccgtaaaaggtgacgtccacgat
atcggcaagaatatcgtcggtgtggtgctgcaatgtaacaactacgaaattatcgatctg
ggcgtaatggtgccgacggataaaatcctgaagaccgcgcgtgaagagcatgtcgatatc
atcgggctgtccgggctgattacgccgtcgttggatgaaatggtcaacgtggcgaaagag
atggagcgtcagggcttcacgctgccgctgctgattggtggcgcgacgacctctaaagcg
cataccgctgtgaagattgagcagaactatagcggcccgacggtttatgtgcagaatgcc
tcgcgctctgttggtgtggtgtctgccctgctgtccagtacgcagtatgacgactttgtt
gcgcgcactcgtaaagagtatgaaaccgtgcgtattcagcacgcgcgtaaaaaaccgaga
acgccgcccgtgacgctggaagcggctcgtgctaacgcttccgatctggattgggataac
tacacgccgcccgttgcacatcggctgggcgtgcaggcggtgacagccagcatcgaaacg
ctgcgcaactatatcgactggacgccgttctttatgacctggtcgctggccgggaaatat
ccccgcattctggaagatgaggtggtgggtgaagaggccaagcgcctgtttgctgatgcc
aacgcgatgctggatgacttgtccgcacgtggcgcactgaatcctcgcggcgtggtaggc
ctcttcccggcgaaccgcgttggcgatgacgtcgtgatttataccgatgaacggcgtgaa
acggtgctgtcagtgagccaccatctgcgtcaacagacggaaaaaaccgacttcccgaac
tactgcctgtctgattttgtggcaccgaaatccagcggcaagccggactatctgggagcc
tttgccgtgaccggcgggctggaagaggatacgttggccgatctgtgggaagctcagcat
gatgattacaacaagatcatggtgaaagcgatttctgaccgtctggcggaagcctttgcg
gagtacctgcatgagcgcgtgcgcaaggtgttctggggctatgcgccgaatgagaacctc
agtagtgagctgctgatccgcgagaattatcagggtattcggcccgcaccgggctatccg
gcttgtcctgaccatacggagaaagtgcaaatctggcagttgctggatgtggaaaaacat
accggcatgaagctcaccgaatcctatgccatgtggccgggtgcatcggtatccggctgg
tatttcagccaccctgacagcaaatactttgccgtcgcgcaaatccagcacgatcaggtg
gaagattacgcggtacgtaaagggatgagcgtgagtgacgttgagcgctggttagcgccg
aatttgggctatgatgcggattaa
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