Paraburkholderia aromaticivorans: CJU94_12840 Help Entry CJU94_12840       CDS       T05169                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism parb  Paraburkholderia aromaticivorans Pathway parb03030   DNA replication parb03410   Base excision repair parb03420   Nucleotide excision repair parb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:parb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CJU94_12840    03410 Base excision repair     CJU94_12840    03420 Nucleotide excision repair     CJU94_12840    03430 Mismatch repair     CJU94_12840  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:parb03032]     CJU94_12840    03400 DNA repair and recombination proteins [BR:parb03400]     CJU94_12840 Enzymes [BR:parb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CJU94_12840 DNA replication proteins [BR:parb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CJU94_12840 DNA repair and recombination proteins [BR:parb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CJU94_12840    NER (nucleotide excision repair)     GGR (global genome repair) factors      CJU94_12840    MMR (mismatch excision repair)     DNA ligase      CJU94_12840   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CJU94_12840 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 MctB Hint DUF4796_N 5_3_exonuc Motif Other DBs NCBI-ProteinID:  ASV98962 UniProt:  A0A248VJC8 LinkDB All DBs Position 1:2807776..2809842 Genome browser AA seq 688 aa AA seqDB search MAPTPVSPSASSAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDRLFKELERIETEHP DLIVPDSPTQRVGGEAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNTNEPP VPVDYAAELKFDGLAISLRYVDGVFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRVP RVLDVRGEVLMFKRDFERLNDRQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAY GIGVLEGMEMPATHSELLDWYKELGLPVNGERAVVQGAEGLLGFFHAVGEKREKLPYDID GVVYKVNRRDEQEALGFVSRAPRFALAHKFPAQEALTRLVAIDVQVGRTGAITPVARLEP VFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPDDAREFVMP TQCPVCGSNIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQ NLVRTPADLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTA KDLARHFGSLDPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGRVTWP EGPPAPKAPQGVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVSKKTDYVVAGAEA GSKLAKAEELGIPVLDEDGMRKLLEGQL NT seq 2067 nt NT seq  +upstreamnt  +downstreamnt atggccccaacccccgtctcaccctccgcaagcagtgccccggcagagcgcgccgcgtgg ctgcgcgcggaactcgaacgcgccaattacgcgtactacgtgctcgaccagccggacctg cccgacgcggaatacgacaggctgttcaaggaactcgagcgcatcgagacggaacatccc gacctgatcgtgccggattcgcctactcagcgagtgggcggcgaggcggccagcggtttc gagccggtcgtgcacgaccagcccatgctgtcgctgaacaacggtttcgcggacgaagac atcgtcgcgttcgacaaacgcgtcggtgacgcgctcggcaagaatacgaacgagcccccg gtgccggtcgactacgcggccgagctgaaattcgacggtctcgccatttcgctgcgttac gtcgacggcgtattcgttcaggcgtccacgcgcggcgacggcacgaccggcgagaacgtc accgaaaacgtccgcacgatccgctccattccgctcaagctcaagggcaaacgcgtgccg cgcgtgctcgacgtgcgcggcgaagtgttgatgttcaagcgcgatttcgagcgcctgaac gatcgccagcgagccgcggagcagaaggagtttgccaatccgcgcaatgcggcggcgggc agtttgcggcagctcgattcgaagatcaccgcgcagcggccgctgtcgttctttgcatat ggaatcggcgtgctcgaaggcatggagatgccggctacccatagtgaactgctcgactgg tacaaggagctcggcttgccggtgaacggcgagcgggcggtggtgcagggcgccgagggt ttgctgggcttttttcacgccgttggcgagaagcgcgagaagctgccgtacgacatcgac ggcgtggtttacaaggtcaaccggcgcgatgagcaggaggcgctcggtttcgtgtcgcgc gctccgcgtttcgcgctggcgcataaattccccgcccaggaagcgctgaccagactcgtc gcgatcgacgtgcaggtcggccgcaccggcgcgatcacgccggtggcgcgactcgaaccg gtgttcgtcggcggcgcgacggtcacgaacgccacgctgcacaacgaagacgaagtgcgg cgcaaggacatccgcatcggcgacacggtgatcgtgcggcgcgctggcgacgtgattccc gaagtggtgagcgcgctgctcgaccggcgtcccgacgacgcccgcgaattcgtcatgccc acgcaatgcccggtgtgcggctcgaatatcgagcggctgcccgacgaggcgattgcgcgc tgtaccggcggcctgttctgtccggcgcagcgcaagcaggcgctgtggcatttcgcgcag cggcgcgcgctggatatcgacggcctgggcgaaaagatcatcgatcaacttgtcgagcag aatctggtgcgcacaccggccgatctgttcaacctcggcttcgcgacgctcgccgaactc gaccgctttgccgaaaagtccgcgcagaacctgctcgactcgcttgaaaaggccaagcac accacgttggcgcgcttcatctacgcgctcggtattcgccatgtgggcgagtcgacggcg aaagacctggccaggcacttcggctcgctggatccgatcatggacgcgtcggtggaagcc ttgctggaagtcaacgacgtcgggccggtagtggccgagtcgattcatcagttcttcgcc gaagagcacaaccgcacggtgatcgagcagttgcgcgcgccgggccgggtcacgtggccg gaggggccgcccgcgcccaaagcgccgcaaggcgtgctggccggcaagacggtggtgttg accggcaccttgccgagcctcgcccgcgaagaagcgaaggaaatgctggaagcagcgggc gcgaaagtggctggatccgtgtcgaagaaaacggattatgtggtggcgggggccgaagcg ggcagcaagttggccaaggccgaggaactcggcatccccgtactcgacgaagatggtatg cgtaagctcctggaggggcagttatga

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