Parabacteroides sp. CT06: CI960_13135
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Entry
CI960_13135 CDS
T05011
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
parc
Parabacteroides sp. CT06
Pathway
parc01501
beta-Lactam resistance
parc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI960_13135
01503 Cationic antimicrobial peptide (CAMP) resistance
CI960_13135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parc03036
]
CI960_13135
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_13135
01504 Antimicrobial resistance genes [BR:
parc01504
]
CI960_13135
Chromosome and associated proteins [BR:
parc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CI960_13135
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_13135
Antimicrobial resistance genes [BR:
parc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CI960_13135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
OEP
Biotin_lipoyl
Lipocalin
Motif
Other DBs
NCBI-ProteinID:
AST54223
UniProt:
A0A223HP49
LinkDB
All DBs
Position
complement(3042829..3044040)
Genome browser
AA seq
403 aa
AA seq
DB search
MDKRMLKITITQLRQIALFAVGMSLLTACGNSQSGMKLGDAEFAVMAVNSTTSDQTTSYP
ATIKGTQDIEVRPQVSGFIVKLCVDEGATVRKGQALFQIDPTQYAAAVGQAKAAVEMAKA
NVSTLTLTERNKKTLFDQKIISDFEYQTAVNQLMSAKASLAQAEAQLVSANQNLSFCTVT
SPSNGVVGTFPYRVGSLVSASIAQPLTTVSEIGDMYVYFSMTEKELLALTKAGGTLKEQL
EKMPAVRLQLADGSTYHHEGKIDAVSGVIDQSTGSVSMRAIFSNEGNVLRSGGTGNIIFP
YTMNDIITIPQSATVEIQDKKFVFVLQSDNTVKNTEIKVSNLDDGKNYLVTNGLKSGDKI
VVEGVQILKDGQEIQPITREQQKAKYDQALKDQHDGNLQTAFN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgaatgctgaaaattacgattactcagttaaggcagatcgcattgtttgcg
gttggtatgtctttattaactgcctgtggaaacagtcagagtggtatgaaattaggggat
gctgagttcgctgtgatggcggtcaattcaacgactagcgaccaaacaacatcctatccg
gctaccatcaaaggtacgcaggatatcgaagtccgtcctcaagtttctggatttatcgtg
aaattatgtgtggatgagggagctacggttcgtaaaggacaggcgttgttccaaattgat
cctacgcagtacgctgctgcggtaggtcaggctaaggccgcggtcgagatggcgaaggca
aacgtaagcactttaacattgaccgagaggaataagaagactttgtttgatcagaaaatc
atcagtgatttcgagtatcaaacagccgtgaaccagctgatgtcggcaaaagcgagcttg
gcgcaggcagaggctcaattggtgagcgctaaccagaacttatctttctgtacggttaca
agtccctcgaacggtgttgtcggtacattcccgtatcgtgtaggtagcttggtaagcgct
tcgatcgctcaaccgctgactaccgtatctgagatcggtgatatgtatgtgtatttctct
atgacggaaaaggagttattggcattgacgaaagccggtggtaccttgaaagagcaatta
gagaagatgccggccgtaagactgcaattggcggatggctctacgtaccatcatgagggt
aagattgatgccgtgagcggtgttatcgatcaatctaccggttctgtaagcatgcgtgct
attttctctaacgagggaaatgtcttacgaagcggtggtaccggtaatattatcttcccg
tatacgatgaacgatatcattacgatccctcaatcggctaccgtggagatccaggataag
aagttcgtatttgtattgcagtctgataatacggtgaagaatacggagatcaaggtttcc
aatttggatgatggtaagaactatttagtaacaaatggcttgaagtctggcgataagatt
gtcgtggaaggcgtacagatcttgaaagacggtcaagagatccagccgattactcgtgag
caacaaaaagcaaagtacgatcaggccttgaaagaccagcatgacggtaatttgcagacc
gcttttaattaa
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