Parabacteroides sp. CT06: CI960_18705
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Entry
CI960_18705 CDS
T05011
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc00300
Lysine biosynthesis
parc00550
Peptidoglycan biosynthesis
parc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CI960_18705
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CI960_18705
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parc01011
]
CI960_18705
Enzymes [BR:
parc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CI960_18705
Peptidoglycan biosynthesis and degradation proteins [BR:
parc01011
]
Precursor biosynthesis
Amino acid ligase
CI960_18705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
SRP54
Motif
Other DBs
NCBI-ProteinID:
AST55228
UniProt:
A0A223HS39
LinkDB
All DBs
Position
complement(4218074..4219534)
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AA seq
486 aa
AA seq
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MELRDLIGALEAPMLMGADNVDITNIQSDSRRVTKGSLFVAVRGTAVDGHAYMDSAIEKG
AVAIVCEEAPSYLEGRCSFIVVKDSAEALGLLVSRWYGDPSRKLVLVGVTGTNGKTTIAT
LLYEMFRKMGHKVGLLSTVCNYIDGEAVPTDHTTPDPLTLHSLMARMVEAGCEYAFMEVS
SHSIDQRRISGLSFDGGIFTNLTRDHLDYHKTVENYLKAKKKFFDDLPAGTFALTNADDK
SGLVMLQNTKAKKLTYSLRTLADFKGKILESHFEGTDLIINGREVMVHFVGRFNAYNLLA
VYGAAVSLGKDPEEVLIVLSTLRSVSGRFETIQSPLGYTAIVDYAHTPDALTNVLNGIHE
VLDGKGRIITVVGAGGNRDKGKRPLMAKEAVKLSDQVILTSDNPRFEEPDDIINDMVAGL
TKMDMERTLCITDRTQAIKTATMLAKKGDVILVAGKGHEDYQEIKGVKQHFDDREKLREI
FSTQQS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaactaagggatttaatcggtgcgttggaagctcctatgttgatgggggcggataat
gtggatatcacgaatattcaatcagactctcgtcgggtgacgaaagggtctttgtttgtc
gctgtgagaggtacggccgtggatggccatgcctatatggacagcgccatagagaagggg
gctgtcgctatcgtatgcgaggaggctccgtcctatttggaggggagatgctcgtttatc
gtggtgaaggattcggcggaggcgttgggtcttttggtttcccgctggtatggtgatcct
tcccggaaattggtgttggtaggcgtgacgggtacgaacgggaagactacgatcgctact
ttattatatgagatgttccggaagatgggacataaggtgggattgctttccacggtatgt
aattatatagatggcgaggcggtaccgacggatcatacgacaccggacccgcttacgctt
cattccttgatggcccggatggtagaggccggatgtgagtatgcttttatggaggttagc
tctcattcgatcgatcagcggcgcatcagcggcttgtctttcgacggggggattttcacg
aacctgacccgcgatcatttggattaccataagaccgtggagaattacttgaaagcgaag
aagaaattcttcgatgacctgcctgccgggacttttgccttgacgaatgccgatgataaa
tccggcttggtgatgttgcagaatacgaaggcgaagaagctgacctattccttgcgtacc
ttggccgatttcaagggaaagatattggaatctcatttcgagggtacagacctgatcatt
aacggtcgggaggttatggtgcatttcgtgggacgtttcaacgcttataacttgctggcc
gtgtatggtgccgcggtttctttagggaaagatcccgaggaggtgttgatcgtgctgagc
acgcttcgctccgtatccggtcgcttcgagacgatccagtctccgctcggttatacggcg
atcgtggattatgctcacacaccggatgccttgacgaatgtactgaatggcattcatgag
gtattggatgggaaaggacgtatcattaccgtcgtgggtgccgggggaaaccgggacaag
gggaaacgcccgctgatggcgaaagaggctgtcaagctgagcgatcaggtaattctgact
tccgataacccgcgctttgaggaaccggatgatattattaacgatatggtagccggattg
acgaaaatggatatggaacgtaccttatgtatcacggaccgtacgcaagcgatcaagacc
gctacgatgttggcgaagaaaggggatgtgatccttgttgccggaaaaggccacgaagac
tatcaggagatcaagggggtgaaacagcactttgacgaccgtgagaagttacgcgagatt
ttttcgacacaacaatcataa
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