Parageobacillus sp. KH3-4: PspKH34_13420
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Entry
PspKH34_13420 CDS
T08468
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PspKH34_13420 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_13420 (nth)
Enzymes [BR:
parg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PspKH34_13420 (nth)
DNA repair and recombination proteins [BR:
parg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PspKH34_13420 (nth)
Prokaryotic type
PspKH34_13420 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BDG46781
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All DBs
Position
1332819..1333469
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AA seq
216 aa
AA seq
DB search
MLTKQQIRYCLDKMGEMFPNAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYK
TPEDYVAVPLEELQQDIRSIGLYRNKAKNIQKLCAMLIEKYDGQVPQDRDELMKLPGVGR
KTANVVVSVAFGIPAIAVDTHVERVSKRLGFCRWNDSVLEVEKTLMKKIPKEEWSITHHR
MIFFGRYHCKAQSPQCHVCPLLDLCREGKKRMSKRG
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaaacaacagattcgctattgtttagataaaatgggggaaatgtttccgaat
gcgcattgcgaattagtgcatcgcaatccgtttgaattattaatcgctgtcgttctatcc
gcccaatgtacagatgcgttggtgaacaaagtaacgaaacggttatttgaaaaatataaa
acgccggaagactatgtggccgtcccgctggaggagttgcagcaagatattcgttcgatc
ggcctttatcgcaataaagcaaaaaatattcaaaaattatgcgcgatgctaatagaaaag
tatgatggacaagttccacaagatcgcgacgagctaatgaaactgcctggagtcgggcgg
aaaacggcgaacgtcgtcgtttctgtcgcctttggcataccggcaatcgccgtcgatacg
catgttgagcgcgtcagtaaacgcctcggtttttgtcggtggaatgattctgtattggaa
gtcgagaaaacattgatgaaaaaaattccaaaagaagaatggtcgattacacatcaccgc
atgatttttttcggccgttaccattgcaaagcgcaatctccgcaatgtcacgtttgtccg
cttcttgatttatgccgggaaggaaaaaagcggatgagcaaaaggggttaa
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