Priestia aryabhattai: I5S86_20775
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Entry
I5S86_20775 CDS
T07135
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
parh
Priestia aryabhattai
Pathway
parh03030
DNA replication
parh03410
Base excision repair
parh03420
Nucleotide excision repair
parh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I5S86_20775 (ligA)
03410 Base excision repair
I5S86_20775 (ligA)
03420 Nucleotide excision repair
I5S86_20775 (ligA)
03430 Mismatch repair
I5S86_20775 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parh03032
]
I5S86_20775 (ligA)
03400 DNA repair and recombination proteins [BR:
parh03400
]
I5S86_20775 (ligA)
Enzymes [BR:
parh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
I5S86_20775 (ligA)
DNA replication proteins [BR:
parh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I5S86_20775 (ligA)
DNA repair and recombination proteins [BR:
parh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
I5S86_20775 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I5S86_20775 (ligA)
MMR (mismatch excision repair)
DNA ligase
I5S86_20775 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I5S86_20775 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
QPN43954
LinkDB
All DBs
Position
complement(4505432..4507762)
Genome browser
AA seq
776 aa
AA seq
DB search
MNAESRIHALRAELDQHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPHLITPDSPTQR
VGGAALAAFSQVRHEVPMLSLGNAFEEADLREFGRRVVEGLDQPGAVDYSCEPKLDGLAV
SLLYRDGQLVQGATRGDGTTGEDISANVRTVRNIPLKLQGKGWPAVLEVRGEVFMSKAGF
DRLNAAQAEAGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVGQVSASIGESHIGI
LEQLKAWGLPISRELRHAAGIEECLAYYRDIGERRNSLPYEIDGVVFKVNSLASQRELGF
RAREPRWAIAHKFPAMEELTEVLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLHNMD
EIARLGLRIGDTVIIRRAGDVIPQVMQVVLERRPEDARPVQVPSACPVCGSQVERTQLVK
RSKGKETTSEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIDGLGEKSVEQLVDEGLIGS
PADLYKLQFDQIVGLEGFAEVSSKKLLDAIEASKRPSLARFIYALGIPDVGEETAKVLAR
SLGSLARVQQALPQVLTYLPDIGLEVAYEIHNFFEDEHNCKVIEQLLGCGMQLQDEGELA
AEFAASTTLAGMIAKLDIASVGPTGAEKLVAKLDSLDKIIAADGIDLRQALAAKQAEAVR
EFFKDEANQKLARDIEAQLLAFGMHWNSEKKVAEGLPLAGQTWVLTGTLERMSRDIAKEK
LESLGAKVAGSVSGKTHCVVAGPGAGSKLAKASELGVKVLDEDAFVVFLGEQGIAI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgaatcccgaatccacgcactgcgcgccgaactcgaccagcacaactaccgc
tactacgtactcgacgagcccagcgtgccggacgccgagtacgaccgcctgttcaacgag
ctcaaggccctcgaagccgaacatcctcacctgatcactcccgactcgcccactcaacgc
gtcggcggcgctgccctggccgcgttcagccaggtgcgccacgaagtgcccatgctcagc
ctgggcaacgccttcgaggaagccgacctgcgtgagttcggccgccgtgtggtggagggc
ctcgaccagccgggcgcggtcgactacagctgcgagcccaagctcgatggcctggcggtg
agcctgctctatcgcgatggccaactggtccagggcgcgacccggggtgacggcaccacc
ggcgaagacatcagcgccaacgtgcgtaccgtgcgcaacatcccgctcaagctgcagggc
aaaggttggccggctgtgctcgaagtgcgtggtgaagtgttcatgagcaaggcgggtttc
gatcgcctcaatgccgcacaggccgaagccgggggcaagaccttcgccaacccgcgcaac
gcagctgccggcagcctgcgccagttggactcgaagatcaccgccagccgcccgctggaa
ttctgctgctatggcgttggccaggtctcggcaagcattggcgagagccatatcggtatc
ctcgagcagctcaaggcatggggcttgccgatcagtcgcgagctcaggcatgcggctggt
atcgaggagtgtctggcttactaccgcgatatcggcgagcggcgcaacagcctgccgtac
gaaatcgatggggtggtgttcaaggtcaacagcctggcctcccagcgcgagctgggcttt
cgcgcccgcgagccgcgttgggccatcgcccataagttcccggccatggaagagctcacc
gaggtgctggatgtggaattccaggtcgggcgtaccggtgcggtcacgccggttgcacgc
ctcaagccggtcaaggtggctggcgtgaccgtgtccaacgccaccctgcacaacatggac
gagattgcccggctgggcctgcgcatcggcgatacggtaattatccgccgtgccggtgac
gtgatcccgcaagtcatgcaggtggtgcttgaacgccgtcccgaagacgcccgaccggtg
caggtgccaagcgcgtgcccggtgtgtggctcccaggttgagcgtactcagctggtcaag
cgtagcaagggcaaggaaaccaccagcgaaggcgcggtgtaccgttgtgtcggccgcctg
gcctgtggtgcccagctcaaacaggcgatcattcactatgtttcgcggcgagccatggat
atcgacggcctgggcgagaagagcgtcgagcagttggtggacgaaggcctgatcggttcg
ccggcggacctctacaagctgcaattcgaccagatcgtcgggctggagggatttgccgaa
gtctccagcaagaaactgctggatgccatcgaggccagcaaacgcccgagcctggcgcgc
ttcatctatgccctgggcatcccggatgtgggggaggagaccgccaaggtactggcccgc
tcgctgggcagcctggcccgggtgcagcaggcgttgccgcaggtgctgacgtacctgccg
gacattggtctggaagtggcctacgagatccacaacttctttgaagacgaacacaactgc
aaggtcatcgaacagttgctcggttgcggcatgcaattgcaggacgaaggtgagctggct
gccgaattcgctgccagcactaccctggccgggatgatcgccaagctcgacatcgcttcg
gtcgggcccacgggcgcggaaaagctggtcgccaagctggacagcctggacaagatcatc
gcggccgacggcatcgacctgcgtcaggcgctggcagcgaaacaggccgaagccgtgcgc
gaatttttcaaggacgaggccaaccagaagctggccagagacatcgaagcccagttgctg
gcgttcggcatgcactggaacagcgaaaagaaggtcgccgagggcttgcccctggctggt
cagacctgggtgctgaccggcacgttggagcgcatgagccgcgacatcgccaaagagaag
ctggaaagcctgggggccaaggtggccggttcggtgtcgggcaagacacactgcgtggtc
gctggccctggcgccggttccaagttggccaaggccagtgagctgggggtcaaggtgctg
gatgaggatgcgttcgtcgtgttcctgggcgagcagggtattgccatctga
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