Pectobacterium aroidearum: I2D83_09345
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Entry
I2D83_09345 CDS
T07244
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pari03009
]
I2D83_09345 (rlmC)
Enzymes [BR:
pari01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
I2D83_09345 (rlmC)
Ribosome biogenesis [BR:
pari03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I2D83_09345 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QPI44748
LinkDB
All DBs
Position
2074228..2075355
Genome browser
AA seq
375 aa
AA seq
DB search
MHCARYSTGTCRSCQWLEKAYPQQLSDKQQHLEGLLQPHAVQRWLPVQPSAQSAFRNKAK
MVVSGSVERPLLGMLHRDGTAVDLCDCPLYPSSFAPIFNVLKVFIARAGLTPYNVARRRG
ELKYLLLTESTQRGTFMLRFVLRSETKLAQLRAAFPWLQQQLPQLEVISANIQPVHQAIM
EGKTEIILSEAAALAEQFNQVPLYIRPQSFFQTNPQVAAALYATARDWVAELNITSMWDL
FCGVGGFGLHCASPEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATGKAEM
PELVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMAKDMTELTNYRALRVQLFDMF
PHTAHYEVLTLLKRA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgcccgctacagcacgggaacctgtcgttcctgccaatggctggaaaaagcc
tacccacagcaactatccgataagcaacagcaccttgaaggcttgctacagccacacgcc
gtgcagcgttggttaccggtgcagccttctgcgcagtctgcgtttcgtaataaagccaaa
atggtggtgagcggcagcgtggagcgcccgctactggggatgctgcatcgtgatggaacg
gcggtggatctttgcgactgcccgctttatccgtccagcttcgcaccgattttcaacgtg
cttaaagtcttcatcgctcgagcggggctgacgccttataacgtggcccgacgccgtggg
gagctgaaatatctgctgctgacggaaagtacgcagcgtggcacgtttatgctgcgtttt
gttttacgttcggaaactaaactggcgcagttgcgtgccgcatttccttggctacagcag
cagttaccacagcttgaggtgatatccgccaatatccagccggtccatcaggcgataatg
gaagggaaaacggaaatcatcctgagtgaggctgccgcgttggccgaacagttcaatcag
gtgccgctgtatatccgcccgcaaagttttttccagacgaacccgcaggtggctgccgcg
ctgtatgcgacagcacgcgactgggttgcagagctgaatatcaccagcatgtgggatctg
ttttgcggagtagggggatttggtctgcattgtgcgtcacccgagatgcgtttgacaggg
attgaaatcagcgcagaggcgatagcctgcgcacgccgctctgcggaacagcttgggctg
aaacaggtggagtttcaggccttggattctacacagttcgcgacaggtaaagcggaaatg
cccgagctggtgctagtcaacccgccacgccgcggtatcggcagcgaactatgcgcttac
ctgagccgtatggcaccggactatattctctattccagctgtaacgctgaaagcatggcg
aaagacatgacagagctgacgaattaccgtgcgctgcgcgtacaactgttcgacatgttc
ccgcatacggcgcactatgaagtgctaacgttactgaaacgtgcttga
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