Parasphingorhabdus cellanae: J4G78_09065
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Entry
J4G78_09065 CDS
T07111
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj01501
beta-Lactam resistance
parj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J4G78_09065
01503 Cationic antimicrobial peptide (CAMP) resistance
J4G78_09065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parj02000
]
J4G78_09065
01504 Antimicrobial resistance genes [BR:
parj01504
]
J4G78_09065
Transporters [BR:
parj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J4G78_09065
Antimicrobial resistance genes [BR:
parj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J4G78_09065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QTD54449
LinkDB
All DBs
Position
complement(1902853..1905975)
Genome browser
AA seq
1040 aa
AA seq
DB search
MIISDVSVKRPVFAVVLSLLLVLAGIVAFLDLPVRQYPAIEPPIVSVDVNYPGAAANVVE
SRITQILEDRIAGVEGIEMIRSSSRDGRSDITIEFSPDRDVDAAANDVRDRVSGALDNLP
EESDPPEINKVDADARPFMWLNLTGEGRESLWLADYADRVLVDRFSSIDGVARVQPSGAS
RPAIRIWLDREKMAASGISPNDIEEALRRENVELPAGRVESSNLNLTVRVARAYGNVDDF
RALVIRRTDDGALLRLGDMARVELGPENVYAHFRSNGLPGVGMGIIRQSGANELQVANDI
KDRIKEITPLLPPGVELAVSYDSSVFIAKAIDNVWQTLAFAAILVISVIYLFLGSVRATI
VPAVTVPISIIGTFFVLWLLGLSINLLTLLALVMAIGLVVDDAIVVLENIYSRIEQGESR
LISAFEGARQVGFAVVATTAVVVAVFVPVMFLPGETGLLFRELAITMIVAVSISTFVALT
LIPVMCSKILKKGGGETKLSRYVDDKFQQTSASYESILSRWISRPFLLGGIAFGLAALFA
GIGLQTLKSEVAPPEDTGFMFGRATIAEGAGWDRLVKTMFDLEELALPLTEEDGPLRRVL
FRAPGSFGPSGDFSSGRIIMFLKPWDERDMTTAETQSAVNKLFRDYPAARVFVSGGSTIG
GRGGEAIRFVIAGDTYEELTRARDALFVAADEYPGIATLESDYKETRPQLVVNVNTLRAA
DLGVSVEEIGRTLETMMGSRNAGTYVDRGEEYDVVLQAEPEDRVTAEDLANVYVRARDDN
LVPLSGLVTLSSRAEAGELNRFNKLRAVTLEGTVADGYSLGESLTFLEDEAASLPEVVSI
GYEGQSRALRQTGGSIWLVLGFTIILVYLVLAAQFESFISPLIIILGVPLAVSGGLLGLT
VMGGTLNLYSQIGLVMLVGLAAKNGILIVEFANQLRDEGLEFAEAILESAKRRFRPVLMT
SIATVAGALPLMLATGAGGASREAIGIVIVWGVGISTILTLIIIPSFYYLLARGTGSPLA
VTRRLKSLRQSKQVPVSIKT
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgattatctctgatgtttcggtcaagcgaccagtttttgcggtcgtgctcagcctgttg
ctggtattggccggtatcgtagcgtttctcgacctgccagtgcggcaatatccagcaatt
gagccgccaatcgtatcggtagatgtcaactaccctggcgcagccgccaatgtagtagaa
tcgcgaattactcagatattggaagaccgtattgccggtgtggaaggtatcgagatgatc
cgttcctcttcccgcgatggccggtccgacattacaattgaattctcgccggatcgcgat
gttgatgcagcagccaatgacgttcgcgaccgtgtgtcgggagcgctcgacaatttgcca
gaggaatctgatccccccgaaattaacaaggtggatgccgatgcccgcccattcatgtgg
cttaatcttaccggagaaggtcgggagtctctttggctggcggattatgcggatcgggtc
ttggtcgaccgtttttcgtcaatagatggggttgcccgagtccaacccagcggcgcatcg
cgtcctgcaatccggatttggctagatcgtgaaaaaatggcagcatctggaatttcgccc
aatgatatagaagaggcgctacgccgggaaaatgttgaactgcctgctggccgggtagaa
tcatcgaacctcaaccttaccgtacgtgtcgctcgggcttacggtaatgtggatgatttt
cgggcactcgttatccggaggaccgatgatggtgcgctgctgcgtctcggcgatatggcc
cgcgtcgagcttggtcctgaaaatgtctacgcccatttccggtccaatggcctgcccggt
gttggcatgggtatcatccgtcaatctggcgcaaatgagctgcaggtcgcgaacgatatt
aaagaccgcatcaaagaaattacccctttactgccgcccggcgttgagctggcggtcagt
tatgacagcagtgtgttcattgccaaggcgatcgataatgtctggcaaacactggccttt
gctgcgatcctggtcatctcggtaatttacctgtttctgggatcagtccgtgccaccatt
gttccggcggttaccgtgccgatttcaataatcggaacgttttttgtgctctggttactt
ggcctttcgatcaatcttctcaccctgctcgccctcgttatggctatcggtttggtcgtc
gacgacgcgatcgtggtgctggaaaacatatattctcgtattgaacagggtgagagccgc
ctgatctctgcgttcgaaggcgcacgccaggtgggtttcgcggttgtcgcaaccactgcc
gtagtagtggcggtgtttgttccagtgatgttcttacccggcgagacgggactgttgttt
cgtgaacttgccatcaccatgatcgtggccgtgtccatatccacatttgttgcgctcaca
ctaatcccggtaatgtgttcgaaaatactgaaaaaaggtggcggcgagaccaagctgagc
cgctatgtcgatgataagtttcagcaaaccagcgctagctatgaaagcatattatctcgc
tggataagcaggccatttctccttggtggtatcgcttttggactggcagcgctatttgct
ggcattggcctgcaaacgttaaaaagtgaggtcgctcccccggaagataccgggttcatg
tttggccgagccaccattgcagagggggcgggctgggaccgattagtcaagactatgttt
gatctggaagagctggcgttgccgctgaccgaagaggatggtccgctgcgccgtgtcctg
ttccgtgcgcccggatcatttggcccttcaggagatttttcgtctggacgaataatcatg
ttcctaaaaccgtgggatgagcgcgatatgacgaccgccgaaacccaatcggcagtcaac
aagctgttccgggactatccggcagctcgggtttttgtatctggcggctcaaccatcggc
gggcgcggtggtgaggccattcgatttgtcattgccggtgacacttatgaagaattgaca
cgcgcgcgcgatgcactgtttgtcgctgctgatgaatatcccggcattgcgacattggag
tcagactataaggaaactagaccgcagctagtcgtgaacgtaaacaccttgagggctgcg
gacctcggcgtgtcggtcgaagaaattggccgaactttggaaaccatgatgggctcacgc
aatgcggggacttatgtggatcgcggcgaggaatatgatgttgtcctgcaagccgagcct
gaagaccgggttacagcggaggacctcgcaaatgtttatgtccgcgctcgcgacgataat
ctggtgccgttatcaggcctcgttacattatccagtcgcgcggaagcaggcgagttgaac
cggttcaataaattgcgcgccgtcactctggagggcacggtggcagacggttattcgttg
ggtgaatcgctgacctttcttgaggatgaagcagcatctcttccagaggtggtctccatc
ggatatgaaggccagagccgtgcgcttcgacaaaccggaggatcaatctggcttgttctg
ggcttcaccatcattctggtttatctcgtgctcgcagcgcaatttgagagctttatcagc
ccgttgatcatcatattgggtgtgccgctggcagtaagcggcgggctattggggctgacg
gtaatgggcgggacgctcaatctgtacagccagataggccttgtgatgttggtcgggctg
gcggccaaaaatgggatattgatcgtcgaatttgccaaccaacttcgagacgaaggcctg
gaatttgcggaagcaatactagaatcggccaaacgccgttttcgtccggtattaatgaca
tctatcgcaaccgttgctggtgctcttccactcatgcttgcaaccggcgctggcggggcg
agtcgtgaagccattggcattgttatcgtctggggcgtcggcatttcgaccatcctgaca
ttaatcatcataccatcattttactatttgctggcccgtgggactggtagtccgctagcc
gtcactcggcggctcaaaagcttgcgccagagcaaacaagttccggttagcattaagaca
taa
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