Paralcaligenes sp. KSB-10: LSG25_06640
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Entry
LSG25_06640 CDS
T07761
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSG25_06640 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_06640 (nth)
Enzymes [BR:
park01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LSG25_06640 (nth)
DNA repair and recombination proteins [BR:
park03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSG25_06640 (nth)
Prokaryotic type
LSG25_06640 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Gmx_para_CXXCG
Motif
Other DBs
NCBI-ProteinID:
UHL65555
LinkDB
All DBs
Position
1458075..1458713
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRAQIFARLQAANPAPTTELLYDSTFQLLIAVMLSAQATDKSVNLATRRFFPDHGT
PAGLLALGEAGLADLIKTIGLYKTKAKNVIKTCGILLEQHQGQVPGDRTALEALPGVGRK
TANVVLNTAFGKPTIAVDTHIFRVANRTGLAPGKNVLQVEQKLEKLIPKEYILNAHHWLI
LHGRYICIARKPKCPQCGIADLCEFKGKTPAL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaagcgcgcccagatcttcgcccgcctgcaagccgccaacccggcaccc
accaccgagttgctttacgacagcacattccagctattgattgccgtcatgctctcggcg
caggccactgacaaatcggtgaatctggccacacggcggtttttccccgatcacggcact
ccggccggcctgctggccctgggcgaggccggcctggccgatctgatcaaaaccataggc
ctgtacaaaaccaaggccaaaaacgtcattaaaacctgcgggatcctgcttgaacagcat
cagggccaggtgcccggcgatcgaaccgcccttgaagccttgccaggggtgggccgcaaa
acggccaatgtggtgctcaacacggcatttggcaagccaaccattgccgtcgacacgcac
attttccgggtcgccaaccgtaccggcctggctcccggaaaaaacgtgcttcaggtcgaa
caaaagctggaaaagctcattcccaaagagtacattctgaatgcccatcattggctgatc
ttgcacggtcgatacatatgtatagcccgcaagccgaaatgcccgcaatgcggaattgcc
gatttgtgcgaattcaagggcaaaaccccagccctataa
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