Pectobacterium araliae: PEC302110_16900
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Entry
PEC302110_16900 CDS
T10257
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
parl Pectobacterium araliae
Brite
KEGG Orthology (KO) [BR:
parl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parl03009
]
PEC302110_16900 (rlmC)
Enzymes [BR:
parl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
PEC302110_16900 (rlmC)
Ribosome biogenesis [BR:
parl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PEC302110_16900 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_32
UPF0020
Motif
Other DBs
NCBI-ProteinID:
BES84593
UniProt:
A0AAN0KHW4
LinkDB
All DBs
Position
1898073..1899230
Genome browser
AA seq
385 aa
AA seq
DB search
MHCARYSTGTCRSCQWLEKAYPQQLSDKQQHLEDLLQPHAVQRWLPVQPSEQSGFRNKAK
MVISGSVERPLLGMLHRDGTAVDLCDCPLYPPSFAPIFDVLKVFIARAGLTPYNVERRRG
ELKYLLLTESTQHGTFMLRFVLRSETKLAQLRAALPWLQQQLPQLEVISANIQPVHQAIM
EGKAEIILSDAAALAEQFNQVPLYIRPQSFFQTNPRVAAALYATARDWVAELNITSMWDL
FCGVGGFGLHCVSPEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATAKAEI
PDLVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMAKDMTELANYRALRVQLFDMF
PHTAHYEVLTLLVKYHSEQESIFVK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgcccgctacagcacgggaacctgtcgttcctgccaatggctggaaaaagcc
taccctcagcaattgtctgataagcagcagcatcttgaagatttgctgcaaccgcatgct
gtgcagcgctggctgcccgtgcaaccctctgagcagtctggatttcgtaataaagccaaa
atggtgataagtggtagcgtggaacgcccgctgctggggatgctgcatcgcgatggaacc
gcggtggatctctgcgattgcccgctttatccgcccagcttcgcgccaattttcgatgtg
cttaaagttttcatcgctcgtgcggggttgacgccttataacgtggaacgccgccgtgga
gaattgaaatacctgctgctgacggaaagtacgcagcacggtacgttcatgctgcgcttt
gtcttgcgctcggaaaccaagctggcgcagctgcgagctgcattgccctggctacagcag
cagttgccccagcttgaggtgatatccgccaatatccagcccgtgcatcaggcgattatg
gaagggaaagcggagattatcctgagtgacgctgcggcactggccgaacagtttaatcag
gtgccgctgtatatccgtccgcagagttttttccagacgaacccgcgggtcgccgctgcg
ctgtatgccacggcacgcgattgggttgcagagctgaatattactagcatgtgggatctg
ttttgcggggtagggggttttggcctgcactgtgtatcccctgagatgcgtttaacgggg
atcgaaatcagcgctgaggcgatagcctgtgcgcgtcgctcggcagaacagttagggttg
aagcaggtggagtttcaggcactggattccacgcagttcgcgacagctaaagcggaaatc
cccgatctggtgctggtcaatccgccacgccgcggtatcggtagcgaactgtgcgcctac
ctgagccgcatggcaccagactatattctctattccagctgtaacgctgaaagcatggcg
aaagacatgacggaactggcgaattaccgtgcgctgcgcgtacagctgttcgacatgttc
ccgcatacggcgcactacgaagtactgacgttattagtgaaatatcatagcgagcaagaa
agtatatttgttaaatag
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