Parasphingopyxis sp. CP4: HFP51_07620
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Entry
HFP51_07620 CDS
T09836
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HFP51_07620 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parp03400
]
HFP51_07620 (nth)
Enzymes [BR:
parp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HFP51_07620 (nth)
DNA repair and recombination proteins [BR:
parp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HFP51_07620 (nth)
Prokaryotic type
HFP51_07620 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QLC22059
LinkDB
All DBs
Position
1582927..1583586
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AA seq
219 aa
AA seq
DB search
MKKADIYEFYARLAEDIPEPRTELNYTNSYTLLVAVALSAQATDVGVNKATKALFEQVTT
PQEMLDLGEAALKEHIKTVGLFNTKAKNVILAAQRLVDNHDGEVPSDRDALEALPGVGRK
TANVVLNEAFGIPTIAVDTHIFRVSNRTGLAPGKTPLAVEKKLEKATPEDFKQHAHHWLI
LHGRYLCKARTPECWRCSVTDFCRYKPKTSEPRGKRKTA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaggccgatatctacgaattctacgcccggctcgccgaagatattcccgagcca
cggaccgagctcaactacaccaattcctacaccctgctcgtcgctgtcgcgctgtcggcc
caggccaccgatgtcggcgtgaacaaggccaccaaggcacttttcgagcaggtcacaacg
ccacaagagatgctcgatctcggcgaagccgcgctcaaggagcacatcaagacagtcggc
ctgttcaataccaaggcgaagaatgtgattctcgctgcccaacgcctcgtcgacaaccat
gatggcgaagtgccgtccgatcgcgacgcgctcgaagcgttgcccggtgtcggccgcaag
accgccaatgtcgtcctcaacgaagcctttgggatcccgaccattgccgtcgacacccat
atttttcgcgtctccaaccggaccggtctcgctcctggcaaaacaccgctcgcggtcgag
aagaagctcgaaaaagcaacgccggaagatttcaaacagcacgcccatcattggctgatc
ctgcatgggcgctatctctgcaaggcacggacacccgaatgttggcgctgttcggtgacc
gacttctgccgctacaagcccaagacatcagagcctaggggaaagcgcaaaactgcttaa
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