Parasphingopyxis sp. CP4: HFP51_08085
Help
Entry
HFP51_08085 CDS
T09836
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
parp
Parasphingopyxis sp. CP4
Pathway
parp01501
beta-Lactam resistance
parp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
parp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HFP51_08085
01503 Cationic antimicrobial peptide (CAMP) resistance
HFP51_08085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parp02000
]
HFP51_08085
01504 Antimicrobial resistance genes [BR:
parp01504
]
HFP51_08085
Transporters [BR:
parp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HFP51_08085
Antimicrobial resistance genes [BR:
parp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HFP51_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QLC22140
LinkDB
All DBs
Position
1678513..1681593
Genome browser
AA seq
1026 aa
AA seq
DB search
MSFRTVSTWAIKNPTPPLVLFLGLMLAGIVSFIRLDVNDSPEIDFPAVQVVIAQPGAAPT
EMENQVTQRVEAAVRNISGVNTLSSFVNEGNSRTFIEFTIGTPVDRAVNDVRNALAQIRG
DLPEGILEPQVVRVEINGGGTIAYFAVENVDMTLEELSWFVDNNVARELLSIEGMAAVDR
GGGVSREIRVILDPARLQSLGITASQVNAQLRATNLNAAGGRAEVAGSEQSVRVLGNAET
AYELGQTDIALGGGRTVKLADIAEVRDLYGEQRSLSKMNNRQVLSFGIERAKGASDVTVY
DEAERVLAEIEEANPGVTFTRLFTTVEYTRENYESAMMALIEGAILAVIVVWFFLRDWRA
TLISAIAIPLSAIPTFWFMDLFGFSLNFISLLALSLVAGVLVDDAIVEIENIVRHMRMGK
SSYQASIDAAEEISLAVLATTMAIVAVFLPVALMPGISGQFFIQFGLTTVVAVVMSLAVA
RLITPLVAAYFLRAEGVREHGEGPVMDRYMALLKWSLVHRWKTAIFGGGGALVATIFAFS
QLGITFQPETDDDFSRVNIEMVPGTTLEETERVSDQVAAILREQPEVRTAFQRIDPGSGR
IFMTLEDDRERKSTEFERETAPLLRAIPDARVTFRSQQGGFSGRDISMVIGGDDPVILQE
QADELVRQMSELDTIIAPRIDGDLRRPEIVVTPRLDLAADLGVTTAELSRAIRIATQGEI
DQNAARFSLSDRQIPIRVALAEESRRDLSTIENLPVTTQNGGSVPLRLVADIGFGSGPTE
IRRYDQRRRIVIGADLAPGLVSGDAMSEINALPFWENMPAGVDRVVAGPEEWQAEMLFNF
FVAVLSGVLLVFAVLVLLYRRIMAPLVNMGSLILAPLGSAIALHIVGQPLSMPVFIGLLM
LLGIVAKNSILLVDFAIEEMDKGVDKDTAIIEAGHKRAQPIVMTTVAMTAGMVPTALALT
GDGAWRSPMGWTVIGGLILSTVLTLVIVPACFSLADSTEKRLRRFFGRALTYKPEDDEKA
TIQPAE
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccggaccgtatcgacctgggcgatcaagaacccaaccccgccgctcgtgctg
tttctcgggttgatgctggctggcattgtcagcttcatccggctcgacgtgaatgacagt
cccgagatcgatttcccggccgtccaggtggttattgcccagcccggcgccgcaccgacg
gaaatggaaaatcaggtcacccagcgggttgaggctgcggtccgcaatatcagcggcgtg
aacacgctctcctccttcgtcaatgaaggcaattcgcgcacctttatcgaatttacgatt
ggtacgccggtcgatcgcgcagtgaatgacgtgcgcaatgcgctcgcccagattcggggt
gacctgccggagggcatattagaaccgcaggttgtccgcgtcgaaatcaatggtggcgga
acgatcgcctatttcgcagtcgaaaatgtcgacatgacgctcgaagagctcagctggttc
gtcgacaataatgtcgctcgagaattgctttcaattgaaggcatggccgcagtcgaccgt
ggtggcggggtaagccgcgaaatccgcgttatccttgatcccgcacgactccagtctttg
ggcatcactgccagtcaggttaatgcacagctccgcgcgaccaaccttaatgcggcaggc
ggccgcgccgaagtggccgggtccgagcaatcggttcgcgttctcggcaatgcagaaacc
gcctatgaactcggccagaccgatattgcactgggcggtggccgaacggtcaaactcgcc
gatatcgccgaagttcgcgatctttatggtgagcagcgttcgctctccaagatgaacaac
cgccaggtgctgagctttggcatcgaacgcgccaagggtgcgtccgacgttaccgtttat
gacgaagccgagcgggtgcttgcggagatcgaggaagccaatccgggcgttactttcacc
cgactcttcacgaccgtggaatatacgcgcgaaaattatgaatccgcgatgatggcactg
atcgagggtgcaatccttgcggttatcgttgtctggttcttcctgcgtgactggcgcgcg
acgctgatctcggcgatcgcgatcccgctctctgccatcccgaccttctggttcatggat
ctcttcggtttctcactcaactttatcagcctcctcgcgcttagtctggtggccggtgtc
cttgtcgatgacgcgatcgtcgagatcgagaacatcgtcaggcatatgcggatgggcaaa
tcctcataccaggcatcgattgatgccgcagaagagatcagcctggccgtgctggccacg
actatggccattgtcgcggtcttcctgcccgtcgcgctgatgcccggcatttccggtcag
ttcttcatccagttcggcctcaccacggtggttgccgtggtcatgagcctcgccgtggcg
cgattaattacgccattggtcgcggcctatttcctgcgtgccgaaggcgtccgcgaacat
ggcgaaggtccggtcatggatcgctatatggcgcttctgaaatggtcgctcgtccatcgc
tggaagaccgctattttcggcggcggcggtgcgctggtcgcaacaatcttcgcgtttagc
cagttgggcatcactttccagccggaaaccgatgacgatttcagccgggtcaatattgag
atggttccgggcacgacgcttgaggaaaccgaacgcgtgtctgaccaggtcgcggccatc
ctgcgcgaacaaccggaagtgcgcacggcattccagcggatcgatccgggcagcggtcgt
atcttcatgacgttggaggatgatcgcgaacgcaagagcaccgagttcgaacgcgaaaca
gcgccgctcttgcgcgctattcccgatgcccgcgtgacattccgatcgcagcaaggcggc
tttagcggccgagacatttcgatggttatcggcggtgacgatcctgttattctccaggaa
caggccgatgagttggtccgccagatgagcgagctggatacgattatcgcaccacgcatc
gacggcgatttgcggcgtccggaaatcgttgtgacaccgcgtctcgacctggctgccgat
ctcggcgtgactacggcagagctcagccgtgcgatccgcatcgcaacccagggtgagatt
gatcaaaacgctgcccgtttttcgcttagcgatcgccagattccgatccgggtggcgctg
gccgaagaatcacgccgtgatctttcgaccatcgaaaacctgccggtgacaacgcaaaat
ggcggctcggttccgctgcgcctcgtcgccgatatcggattcggttcgggtccgacggaa
attcggcgctatgaccagcgccgccgcatcgtgattggcgccgatctcgcgcccggcctg
gtgagcggcgatgcgatgtcggagatcaatgcccttcccttctgggaaaacatgccggcg
ggtgtcgatcgcgtcgttgccggtcccgaagaatggcaggcagaaatgctgttcaacttc
ttcgtggccgtgctgtccggggtgctgctagtctttgccgtccttgtgctgctgtatcgc
aggatcatggcgccgctcgtgaatatggggtcgctgatcctggccccactaggcagtgcg
attgcgctccacattgtcggtcagccgctctccatgccggtctttatcggattgttgatg
ctgcttggtattgtcgccaaaaactcgatcctgctcgtcgatttcgcaatcgaggaaatg
gataagggcgtcgacaaggataccgcaattatcgaagcgggccacaaacgcgcccagccg
atcgtgatgacgaccgtcgccatgaccgcaggcatggtcccaacggcccttgccctgacc
ggcgatggggcgtggcggtctcccatggggtggacggtgattggcggccttatcctctcg
accgtactgacgctcgtgatcgtgccggcttgcttcagtctggctgacagtaccgaaaaa
cggctgcgtcgcttcttcggtcgggcgcttacctacaagcccgaagatgacgagaaggca
acgatccagcccgccgaatga
DBGET
integrated database retrieval system
