Paracoccus sp. Arc7-R13: EOJ32_13420
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Entry
EOJ32_13420 CDS
T06050
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr01501
beta-Lactam resistance
parr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EOJ32_13420
01503 Cationic antimicrobial peptide (CAMP) resistance
EOJ32_13420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parr03036
]
EOJ32_13420
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parr02000
]
EOJ32_13420
01504 Antimicrobial resistance genes [BR:
parr01504
]
EOJ32_13420
Chromosome and associated proteins [BR:
parr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EOJ32_13420
Transporters [BR:
parr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EOJ32_13420
Antimicrobial resistance genes [BR:
parr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EOJ32_13420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_AAEA_pHBA
HH_EMRA
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
HH_YBHG
BSH_CusB
ODF2_C
Biotin_lipoyl
HmpF
BSH_YknX
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AZY95285
LinkDB
All DBs
Position
2704606..2705919
Genome browser
AA seq
437 aa
AA seq
DB search
MPKHSLATGAAMVAAILSTSAAWAQAPEGMPPKQVGVMQVAVQDVPRIVTLPGRAVAVSE
TAIRPRVGGIVTEILYDPGAAIEAGTPMFRIEDTTYQANLASAEAQVASARAQVTQSQSS
FDRTQQLLGSGTTQAQVEQAQAALDQANAALQSAEADLTLAQAELGWTTVTSPLSGIASV
SAASVGDLVTAGQADAMATVTQLDPIEVDMYEPSSRFLSVLDDINDGNLRLNDELAATLT
LENGREYQAVGQLVAPGVTVSTSTGSIDTRFRFDNPDNLLLPGMFLRGQVDLGVTSAILV
SQSSATRDKVGTLTAWVVEDGKVSQRQLTEDGTYKHQWIVTDGIEDGETLVVDGLTGLAE
GMEVVTVPVTIDETGVVREQAPAQGAPADAAPTDAAPTDAASADTAPDAAAADAGTDTGP
ADAAPAEADAAPAGATE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacacagccttgcgaccggcgccgccatggtcgccgcgattctgtccacctcc
gcggcatgggcacaggcgcccgaagggatgccgcccaagcaggtgggcgtcatgcaggtg
gcggttcaggacgttccgcgaatcgtgaccctgcccggtcgcgcggtcgcggtgtcggag
accgccatccgcccccgcgtcggcggcatcgtgaccgagatcctgtacgatcccggcgcc
gcgatcgaggcgggcaccccgatgttccgcatcgaggacaccacctatcaggcgaacctg
gccagtgccgaggcgcaggtcgcctctgcccgcgcgcaggtgacgcagtcgcagtcgtcg
tttgaccgtacccagcagctgctggggtctgggacgacccaggcccaggtcgaacaggcc
caggccgcgctggaccaggcgaacgccgcgctgcaatcggccgaggccgacctgacgctg
gcacaggccgaactgggctggaccacggtcaccagccctctgtcgggcatcgccagcgtg
tcggcggcatcggtgggcgatctggtgaccgccggacaggcggacgccatggccaccgtc
acccagctggacccgatcgaggtcgacatgtacgaaccctcgtcgcgcttcctcagcgtg
ctggacgacatcaacgacggcaacctgcgcctgaacgacgaactggccgcgaccctgacg
ctggagaacggccgcgaataccaggcggttggccagctggtcgcgcccggcgtgaccgtg
tcgacctcgaccgggtcgatcgacacgcggttccggttcgacaatcccgacaacctgctg
ctgccgggcatgttcctgcgcgggcaggtcgatctgggcgtgacctcggcgatcctggtg
tcgcagtcgtcggccacgcgtgacaaggtcggcaccctgacggcctgggtcgtcgaggat
ggcaaggtcagccagcgccagctgaccgaggacggcacctacaagcaccagtggatcgtc
accgacggcatcgaggatggcgagaccctggtcgtcgacggtctgacagggctggccgag
ggcatggaggtcgtcaccgtccccgtgaccatcgacgaaaccggcgtcgtgcgcgaacag
gcccccgcccaaggcgcccccgccgatgcagcccccacggatgcagcgcccacggatgcg
gcctccgccgacacggcccccgacgcagccgcggccgacgcgggaaccgacaccggcccc
gccgacgcagcccccgcggaggcggatgccgcccccgccggcgcgacggagtaa
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