Paracoccus sp. Arc7-R13: EOJ32_14795
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Entry
EOJ32_14795 CDS
T06050
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
parr
Paracoccus sp. Arc7-R13
Pathway
parr00300
Lysine biosynthesis
parr00550
Peptidoglycan biosynthesis
parr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
parr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EOJ32_14795
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EOJ32_14795
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parr01011
]
EOJ32_14795
Enzymes [BR:
parr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EOJ32_14795
Peptidoglycan biosynthesis and degradation proteins [BR:
parr01011
]
Precursor biosynthesis
Amino acid ligase
EOJ32_14795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AZY95304
LinkDB
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Position
complement(2981055..2982524)
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AA seq
489 aa
AA seq
DB search
MTLSQLGLRAPGGRDPRITGLSIDSRTIKPGHLFAALPGSAVHGGEFIQYALRMQAAAVL
TDRQGAEIAADVLSGWDGALIVAEDPRAALAGAASLWFADQPDHVVAVTGTSGKTSVASF
TRQIWQALGHKAISLGTMGVEGDHQAKLAHTTPDPLTLHRVLAEAVAAGVTHAAMEASSH
GLDQRRLDGVRVEAGAFTNFSQDHLDYHAGFDEYFAAKALLFNRVLEDGAAAVINIDSQR
GRQMADIATDRGLALTTVGTGEAAMLRILGQRYDATGQDLRFSVMGRAHLVRLPLIGGFQ
AENVLAAMGLCLASGDSADDILRVLPQLTTVRGRMQLVAQRENGAAVFVDYAHKPGAVVA
ALQSLRPHVMGRIVCIIGAGGDRDRGKRPLMGEAARDHADVVIVTDDNPRTEDPALIRAA
VMASAGPDATEIADRAEAILRGVDALQPGDALLICGKGHETGQIVGQDVYPFDDAEQASV
AVAALDGRI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgtcgcagctggggctgcgcgcccccggtgggcgtgacccgcggatcacgggg
ctgtccatcgacagccgcacgatcaagcccgggcacctgttcgcggccctgccgggatcg
gccgtccatggcggcgaattcatccagtacgcgctgcgcatgcaggccgccgccgtcctg
accgaccgtcagggcgccgagatcgccgccgacgtcctgtcgggctgggacggggcgctg
atcgtggccgaggatccgcgcgcagccctggccggcgccgcgtcgctgtggttcgccgat
cagcccgaccatgtcgtggccgttaccggcaccagcggcaagaccagcgtggccagcttc
acccgtcagatctggcaggcgctgggccacaaggcgatcagcctgggcacgatgggggtc
gagggcgatcaccaggcgaagcttgcccataccacccccgatccgctgaccctgcaccgc
gtcctggccgaggcggtcgccgcgggcgtcacccatgccgcgatggaggcctccagccac
ggattggatcagcgccgcctggacggggtgcgggtcgaggccggggccttcaccaatttc
agccaggatcacctggattaccacgcgggctttgacgaatatttcgcggccaaggccctt
ttgttcaaccgcgtgctggaggacggagccgctgccgtcatcaacatcgacagccagcgc
ggacgccagatggccgacatcgcgaccgatcgcggcctggccctgaccaccgtcggcacc
ggagaggccgcgatgctgcgcatcctgggccagcgctatgacgcgacggggcaggatctg
cggttctcggtgatggggcgggcgcatctggtgcggctgccgctgatcggcgggttccag
gcggaaaacgtgctggcggcgatgggcctgtgcctggcctcgggcgacagcgccgacgac
atcctgcgcgtgctgccgcagctgaccaccgtgcggggccgaatgcagctggtcgcgcag
cgcgagaacggtgcggcggtctttgtcgattacgcccacaagccgggcgcggtggtcgcc
gcgctgcaatcgctgcgcccgcatgtgatggggcgcatcgtctgcatcatcggcgcgggc
ggcgaccgcgaccggggcaagcgcccgctgatgggcgaggccgcgcgcgatcatgccgat
gtggtgatcgtcaccgacgacaacccccggaccgaggacccggccctgatccgtgccgcc
gtcatggccagcgcgggccccgacgcgacagagatcgccgaccgggccgaggcgatcctc
cgcggcgtcgatgcgctgcaaccgggcgacgcgctgctgatctgcggcaagggtcatgag
accggccagatcgtggggcaggacgtctatcccttcgacgatgccgaacaggcctcggtc
gcggtggcggcactggacgggcggatatga
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