Paracoccus suum: DRW48_10755
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Entry
DRW48_10755 CDS
T05723
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pars
Paracoccus suum
Pathway
pars03030
DNA replication
pars03410
Base excision repair
pars03420
Nucleotide excision repair
pars03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DRW48_10755
03410 Base excision repair
DRW48_10755
03420 Nucleotide excision repair
DRW48_10755
03430 Mismatch repair
DRW48_10755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pars03032
]
DRW48_10755
03400 DNA repair and recombination proteins [BR:
pars03400
]
DRW48_10755
Enzymes [BR:
pars01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DRW48_10755
DNA replication proteins [BR:
pars03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DRW48_10755
DNA repair and recombination proteins [BR:
pars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DRW48_10755
NER (nucleotide excision repair)
GGR (global genome repair) factors
DRW48_10755
MMR (mismatch excision repair)
DNA ligase
DRW48_10755
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DRW48_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AXC50111
UniProt:
A0A344PL56
LinkDB
All DBs
Position
2201874..2204039
Genome browser
AA seq
721 aa
AA seq
DB search
MARGSENTGSGASAPDRAAIGSPDVEALPPEDAAAEIVRLSTQIEAANLAYHQADAPEID
DATYDSLKRRLQELEAAFPALSSAASPTQKVGAAPAPGFRKLTHARPMLSLENAFADSEV
DEFAARVRSFLRLAADAPLAITAEPKIDGLSLSLRYEDGRLVSAATRGDGATGEDVTANA
RHISGLPLELHEAPKLLEVRGEVYMTHADFAALNASGAVSGSGKPFSNPRNAAAGSLRQL
DATITAARPLHFFAYAWGATSEPLAATQFGAVARLGAMGFQTNPLMQRCETTQCLLVVYR
KIEAQRASLGYDIDGVVYKVDDLALQARLGMRSTTPRWALAHKFPAETAWTTLERIEIQV
GRTGALSPVARLAPVTVGGVVVQNATLHNEDYIAGRDATGAMIREGRDIREGDRVMVYRA
GDVIPKIADVDLTARGAGARPYAFPNLCPACGADAVREPGDAVRRCTGGLACPAQAIEKL
RHFVSRGAFDIEGLGAKQVEAFHALGWISEPADIFHLGERHRDALKTTAGWGERSVGNLL
GAIEQRRHIGLDRLIFALGIRHVGETAARLLARHYHDWPSFIAAVDEAHDEASPAWAALN
AIDGVGTVLARSLTAAFAQPTERAAINRLVDQLTEIEPVAAPTAQTEISGLTVVFTGTLE
RMTRAEAKARAEAMGAKVAGTVSTRTDLVVAGPGAGSKAKKAADLGIRVVDEDEWLTIAA
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcggcagcgaaaacaccgggtccggggcgagcgcgcctgatagggcggctatc
ggcagtcccgatgtcgaagccctgccgcccgaagacgcggcagcggagatcgtccgactt
agcacacagatcgaagcggcgaatctcgcctatcatcaggcggacgcgcccgagatcgac
gacgcgacctatgactccctcaagcgccgtctgcaggaacttgaagctgcctttccggcg
ctctccagcgcagccagccctacgcaaaaggtcggcgccgcgcctgcccctggttttcgc
aagctgacccatgcccgaccaatgctgtcgctggaaaatgccttcgcggacagtgaggtc
gacgagtttgcggcgcgcgtcaggtcgttcctgcgcttggccgctgacgcgcctttggcg
atcactgccgagcccaagatcgacggcttgtcactgtcgctgcgctacgaggatggccgg
ctggtcagtgccgcgacacggggcgacggggccacgggcgaggatgtgaccgccaacgcc
cgccacatcagcggactgccgctggaattgcacgaggcgccgaaattgctggaggtgcgg
ggcgaggtctatatgacccatgccgattttgccgcgctgaacgcctccggcgcggtaagc
ggttccggcaagccgttctcgaacccgcgcaacgccgccgccggctcgctgcggcaactc
gatgcgacgatcaccgctgcgcggccgctacacttcttcgcctatgcgtggggcgcgaca
tccgagccgcttgccgccacccaattcggggcggtcgcgcggctgggcgccatgggattt
cagaccaaccccctgatgcaacgctgcgagacgacccagtgcctgctggtcgtctatcgc
aagatcgaggcgcagcgcgccagcctcggctacgacatcgacggcgtcgtctacaaggtc
gatgacctcgcgctacaggcgcgccttggcatgcgctcgaccacgccgcgctgggcactc
gcgcacaaattcccggccgaaaccgcctggaccaccctcgagcggatcgagattcaggtc
ggccggacgggcgcgctgtcccccgtcgcgcgtctcgctccagtcacggtcggcggcgtg
gtggtccagaacgcgaccttgcacaacgaagactacatcgccggccgtgatgccaccggg
gcgatgatccgtgagggccgcgacattcgcgagggcgaccgggtgatggtctaccgggcc
ggcgacgtgatccccaagattgccgatgtcgatctgacagcacgcggcgcaggggcgcgg
ccctatgcctttcccaatctttgccccgcctgcggagcggatgcggtgcgagagccgggt
gatgctgtgcgccgctgcacgggcggtctggcctgtcccgcacaggccattgaaaaactg
cgccactttgtctcgcgtggcgcctttgacatcgaggggctgggcgccaagcaggtcgag
gctttccatgcgctcggctggatcagcgagccggcggatatcttccatcttggcgaacgg
caccgcgacgcgttgaagaccacggcgggctggggcgagcgatcggtgggcaacctcctc
ggcgcgatagagcaacggcgccacatcgggctcgaccggctgatctttgcactcggcatc
cgccacgtcggcgagactgccgcccgtctgctggcccggcattatcatgactggcccagc
tttatcgcggcggtggacgaggcgcatgacgaggcttccccggcctgggccgcgctcaac
gcaatcgacggtgtcggcacagtcctggcccggtcgctgaccgccgcctttgcgcaaccg
accgaacgcgctgccatcaaccgtctggtcgatcagctgacggagatcgagccggtcgcc
gcgccaaccgcacagaccgagatttccggcctgacggtcgtctttaccggcacgctagag
cggatgacgcgggccgaggcgaaggcgcgggccgaggccatgggcgccaaggtggccggg
acggtttcgacgcggaccgatctggtggtggccgggcccggggcgggatcaaaggcgaag
aaggcggcggatctgggcatcagggtcgtcgacgaggacgaatggctgacgatagcagcc
agttga
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integrated database retrieval system
