Paracoccus jeotgali: CYR75_01630
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Entry
CYR75_01630 CDS
T05276
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
paru
Paracoccus jeotgali
Pathway
paru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYR75_01630 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paru03019
]
CYR75_01630 (rnr)
03016 Transfer RNA biogenesis [BR:
paru03016
]
CYR75_01630 (rnr)
Enzymes [BR:
paru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CYR75_01630 (rnr)
Messenger RNA biogenesis [BR:
paru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CYR75_01630 (rnr)
Transfer RNA biogenesis [BR:
paru03016
]
Prokaryotic type
tRNA degradation factors
CYR75_01630 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
DD_DDX21-DDX50
ZSWIM1-3_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AUM73163
UniProt:
A0A2K9MC26
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All DBs
Position
316671..318929
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AA seq
752 aa
AA seq
DB search
MAVPSKQQILDWIADHPDADSKRDLAKAFGLKGNERVELKRLLRDMAAEGQLVRRRSDQR
EAGSLPPVTVVQVMPPDGAGDLFVRPIEGADEPARRILYQPRPQDPALGPGDRFLARLAP
ERGEDYDYTARLIRRIGEVSDKVVGIFRQQAEGGRILPIDKGADREWRVRAGDTLDARDG
ELVEATQTGPRGRMGLPQARITERLGDPSAPRAVSLIAIHQHNIPDEFPAEVIREADAKP
PADMTGREDLRHLDLVTIDPLDARDRDDAVTAYPDTDPKNPGGMVMWVAIADVAYYVTPG
SPLDREARKRGNSTYFPDRVVPMLPDTLSGDLCSLHEDVDRAVVAVRMRIDAQGNKIGHD
FHRGMMRSRASLSYEQAQAAIDGQPDAATAPLLDQVLRPLWDAYDRLAASRKRRQPLDLD
LPERRIVLDDEGRVTSVNFKDRFDAHRLIEEFMVLANVAAAEELLARRRPLLFRVHEEPT
LEKLDALREVAQASGFVLAKGQVLHTSQLNRLLAQAEGTDFDELINVSTLRAMTQAYYHP
ENLGHFGLALRSYAHFTSPIRRYSDLIVHRALITAHGWGAGGLSAWDIDHLEETATQISN
TERRSMEAERDTTDRYLAAYLSERVGTELTGRISGVQKFGAFVKLDETGADGLLPIREIG
NEYFHYDPDAQTLIGSETDLKIGIGQRVTVRLTDASPLTGGLTLELLELDGEAVARGPKS
KRGRVTSRRPSALKSKQRADERRAKRMRRRPG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgccgagcaagcagcagatccttgactggatcgccgatcatcccgacgcggat
tccaaacgcgatctggccaaggcgttcggcctgaaaggcaatgagcgggtcgagctgaag
cggctgctgagggacatggccgccgaggggcagttggtccgccgccgcagcgatcagcgc
gaggcgggcagcctgccgccggtgacggtggtgcaggtgatgccgcccgatggcgcgggc
gatctgttcgttcgcccgatcgagggcgcggacgaacccgcgcgccgcatcctctatcag
ccgcggccgcaggaccccgcccttggtcccggcgaccgctttctggcgcggctcgcgccc
gagcggggcgaggattacgactataccgcccgcctgatccgccgcatcggcgaggtcagc
gacaaggtcgtgggcatcttccgccagcaggccgagggcgggcgcatcctgcccatcgac
aagggcgccgaccgcgaatggcgggtgcgggccggcgacacgctggacgcccgcgacggc
gagttggtcgaggccacgcagaccggaccgcgcggccgcatgggcctgccgcaggcgcgc
attaccgaacgtctgggcgatccctcggccccgcgcgcggtaagcctgatcgccattcac
cagcacaacatccctgacgaattcccggccgaggtgatccgcgaggccgatgccaagccc
cccgccgacatgaccgggcgcgaggatctgcgccatctcgatctggtgaccatcgacccc
ctcgatgcccgcgaccgcgacgacgcggtgaccgcctatcccgacaccgacccgaagaac
cccggtggcatggtgatgtgggtcgccatcgccgatgtggcctattacgtcacccccggc
agcccgctggaccgcgaggcgcgcaagcgcggcaactcgacctatttcccggaccgggtg
gtgccgatgctgcccgacacgctgtcgggcgatctgtgcagcctgcatgaagacgtcgac
cgcgcggtggtcgcggtgcggatgcggatcgacgcgcagggcaacaagatcgggcacgat
ttccatcgcggcatgatgcgctcgcgcgccagcctcagttacgaacaggcgcaggcggcc
atcgacggccagcccgacgcggcgacggcgccgctgctcgaccaggtgctgcggccgcta
tgggatgcctatgaccggctggcggcatcgcgcaaacggcgtcagccgctggatctggac
ctgcccgaacggcggatcgtgctggatgatgaggggcgcgtcacctcggtcaatttcaag
gaccgcttcgatgcccaccggctgatcgaggagttcatggtcctcgccaatgtcgccgcc
gccgaggaattgctcgcccgccgccgcccgctgctgttccgcgtccacgaagaaccgacg
ctggaaaagctggatgcgctgcgcgaggtggcgcaggcgtcgggtttcgtgctggccaag
gggcaggtgctgcataccagccagttgaaccgactgctggcgcaggccgaggggacggat
ttcgacgaactcatcaacgtctcgaccctgcgcgcgatgacgcaggcctattaccacccg
gaaaatctggggcatttcggcctcgcgctgcggtcttacgcgcatttcacctcgcccatc
cggcgctattccgacctgatcgtgcatcgggcgctgatcaccgcccatggctggggcgca
ggcgggctgtcggcctgggatatcgaccatttggaagagaccgcgacccagatctcgaac
accgaacgccgcagcatggaggccgagcgcgacaccaccgaccgctatctggccgcctat
ctgtccgagcgggtcgggaccgaactgaccgggcgcatcagcggcgtgcagaaattcggc
gccttcgtgaagctggacgagaccggcgccgacgggctgctgccgatccgcgagatcggg
aacgagtatttccactatgaccccgacgcgcagacgctgatcggctcggaaaccgacctg
aagatcggcatcggccagcgcgtcaccgtgcgcctgaccgacgccagccccctgaccggc
gggctgacgctggaactgctggaactcgacggcgaggcggtggcgcgggggccgaagtcg
aagcgcgggcgggtgaccagccgtcggccctcggcgctgaaatccaagcagcgcgcggat
gaacgccgcgccaagcggatgcggcggcggccgggctag
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