Paracoccus jeotgali: CYR75_02130
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Entry
CYR75_02130 CDS
T05276
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
paru
Paracoccus jeotgali
Pathway
paru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYR75_02130 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paru03021
]
CYR75_02130 (rpoC)
03400 DNA repair and recombination proteins [BR:
paru03400
]
CYR75_02130 (rpoC)
Enzymes [BR:
paru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYR75_02130 (rpoC)
Transcription machinery [BR:
paru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYR75_02130 (rpoC)
DNA repair and recombination proteins [BR:
paru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYR75_02130 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
S-Me-THD_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AUM73250
UniProt:
A0A2K9MCA2
LinkDB
All DBs
Position
424761..428981
Genome browser
AA seq
1406 aa
AA seq
DB search
MNQELATNPLNPLAQPRQFNEIKISLASPEEILAWSYGEVKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGLVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLMSEEEFMDAQDQFGADAFQ
ADIGAEAIRAMLANIDLDATAEQLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWM
VMTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGNNRRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLDAKGYSTTVKQSKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGSPIIVPSQDMVLGLYYTTMMRDGMVGEGMSFASVDEVEHAL
AAGEVHLHAKVTARLKQVDDDGKEITQRFETTPGRVRLGALLPLNSKAPFELVNRLLRKK
DVQHVIDTVYRYCGQKEAVIFSDKIMGLGFREAFRAGISFGKNDMVIPDNKWDIVGRVED
QVKEFEQQYLDGLITQGEKYNKVVDAWSKCNDEVTTAMMDTISARKFVDGAEQEPNSVYM
MAHSGARGSVTQMKQLGGMRGLMAKPNGEIIETPIISNFKEGLTVLEYFNSTHGARKGLS
DTALKTANSGYLTRRLVDVAQDCIVREYDCGTEQAITATAAVNDGEIIAPLSERILGRTA
AEDVLVPGTDEVILRSGELIGERKADEIETAGVQTVRIRSALTCESDDGVCAMCYGRDLA
RGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFIAANQEGTVAFENEAL
IVNEAGEQIVMSRNMVVILLNRQNEPVATHKLFYGSKLMVKAGEEVTRGQKLFEWDPYTL
PIIAEKPGIAKFVDLVAGISVRDETDDATGMTQKIVTDWRSTPKGGDLKPEILIMGADGE
PVRNDQGNPVIYPMSVDAVLSIEDGQEIKAGDVVARIPREGARTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGYVRFGKDYKNKRRISIEPAAEGVDPVEYMVPKGKHIPVQEGDFVQK
GEYIMDGNPAPHDILRIMGIEALADYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKIEI
LDSGDTTLLKGEHVERDEFEEENAKITAKGGRPATGEPVLLGITKASLQTRSFISAASFQ
ETTRVLTEAAVQGKRDKLVGLKENVIVGRLIPAGTGGATMRMRKIASDRDAEVIESRRAE
AEAAAAALEPPAPTEAAEPAPVPSDE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaacttgccaccaatccgctgaacccgctggcacagccgcggcagttcaac
gaaatcaagatctcgctggcctcgcccgaagaaattctggcctggtcctatggcgaggtg
aagaagcccgaaaccatcaactaccgcacgttcaagcccgagcgtgacgggctgttctgc
gcgcgcatcttcggtccgatcaaggactacgaatgcctgtgcggcaaatacaagcgcatg
aagtatcgcggcctcgtctgcgagaaatgcggtgtcgaggtgacgctgcagaaggtccgg
cgcgagcgcatgggccatatcgaactggccgcgccggtcgcccatatctggttcctcaag
tcgctgccctcgcgcatcggcctgatgctggacatgacgctgcgcgatctggagcggatc
ctctatttcgaaaactacgtcgtcatcgaacccggcctgaccgacctgacctatggtcag
ctgatgtcggaagaagagttcatggacgcgcaggaccagttcggcgccgacgccttccag
gccgatatcggggccgaggcgatccgcgccatgctggccaatatcgatctggacgccacc
gccgagcagcttcgcgaggagctgaaggaggccacgggcgagctgaagccgaagaagatc
atcaagcggctgaagatcgtcgaaagcttcctcgaatccggcaaccgtccggaatggatg
gtgatgacggtgatcccggtcatcccgccggaactgcgcccgctggtgccgctggatggc
ggccgctttgcgacctcggacctgaacgacctgtatcgccgggtcatcaaccgcaacaac
cgcctcaagcggctgatcgagctgcgcgcgcccgacatcatcgtgcgcaacgaaaagcgg
atgctgcaggaatcggtcgacgcgctgttcgacaacggccgtcgtggccgcgtgatcacg
ggcaacaaccgtcgcccgctgaaatcgctgtccgacatgctgaagggcaagcagggccgc
ttccggcagaacctgctgggcaagcgggtcgacttctcgggccggtcggtcatcgtgacc
gggccggaactgaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttc
aagccgttcatctattcgcgcctcgacgccaagggttattcgaccaccgtcaagcagtcc
aagaagctggtcgaaaaggaacgccccgaggtctgggacatcctggacgaggtcattcgc
gagcatccggttctgctgaaccgggcgccgacgctgcaccgtctgggcattcaggcgttc
gagccgatcctgatcgagggcaaggcgatccagcttcacccgctggtctgctcggccttc
aacgccgacttcgacggcgaccagatggccgttcacgtcccgctgtcgctggaagcgcag
ctggaagcgcgcgtcctgatgatgtcgaccaacaacgtgctgtcgccggcgaacggctcg
ccgatcatcgtgccgtctcaggacatggttctggggctgtactacaccacgatgatgcgt
gacggcatggtgggcgagggcatgtccttcgccagcgtcgacgaggtcgagcacgccctt
gccgccggcgaggtgcatctgcacgccaaggtcaccgcccgtctcaagcaggtggatgat
gacggcaaggagatcacccagcgtttcgagaccacgccgggccgcgtccggctgggcgcg
ctgctgccgctgaacagcaaggcaccgttcgagctggtgaaccgcctgctgcgcaagaag
gacgtgcagcacgtcatcgacacggtgtatcgttattgcggccagaaagaggcggtgatc
ttcagcgacaagatcatgggtctcggcttccgcgaggcgttccgcgccggcatctcgttc
ggcaagaacgacatggtgatccccgacaacaagtgggacatcgtgggccgcgtcgaggat
caggtgaaagagttcgaacagcagtatctggacggcctcatcacccagggcgagaagtac
aacaaggtcgtggacgcctggtcgaagtgcaacgacgaggtgacgacggcgatgatggac
accatctcggcgcgcaaattcgtcgacggtgccgagcaggaaccgaacagcgtctacatg
atggcgcactccggtgctcgtggctcggtcacgcagatgaagcagctgggcgggatgcgc
ggtctgatggccaagccgaatggcgagatcatcgagacgccgatcatctcgaacttcaag
gaaggtctgaccgttcttgaatacttcaactcgacccacggggcgcggaaaggtctgtcg
gatacggcgctcaagaccgcgaactctggctatctgacgcggcgtctggtggacgtggcg
caggactgcatcgtgcgggaatatgattgcggcaccgaacaggcgatcaccgccaccgcc
gcggtcaatgacggcgagatcatcgccccgctgagcgagcgcatcctgggccgcaccgcg
gccgaggacgtgctggttcccggcacggacgaggtcatcctgcgcagcggcgagctgatc
ggcgagcgcaaggcggacgagatcgaaaccgccggcgtgcagaccgttcgcatccgctcg
gctctgacctgcgaaagcgacgacggggtctgcgcgatgtgctatggtcgcgatctggcc
cgtggcacgctggtcaatatcggcgaggctgtcggcatcatcgccgcgcagtccatcggc
gaacccggcacccagctgacgatgcggaccttccacatcggcggcgtggcgcagggcggt
cagcagagcttcatcgccgcgaaccaggaaggcaccgttgcctttgaaaacgaggcgctg
atcgtgaacgaggcgggcgagcagatcgtcatgtcccgcaacatggtcgtgatcctgctg
aaccgtcagaacgagccggtggcgacgcacaagctgttctatggctcgaagctgatggtg
aaggcgggcgaagaggtcacgcgcggacagaagctgttcgaatgggacccctacaccctg
ccgatcatcgccgaaaagccgggcatcgccaaattcgttgatctggtggcgggcatttcc
gtccgggacgagaccgacgacgcgaccgggatgacgcagaagatcgtgaccgactggcgc
tcgacgccgaagggtggcgatctgaagccggagatcctgatcatgggcgccgatggcgag
ccggtccggaacgaccagggcaacccggtcatctatccgatgtcggtggatgcggttctg
tcgatcgaggacgggcaagagatcaaggcaggcgacgtggtcgcgcggatcccgcgcgag
ggtgcgcgcaccaaggacatcaccgggggtcttccccgcgtggccgaactgttcgaggcg
cgccgtcccaaggatcacgccatcatcgccgagattgacggctatgtccgctttggcaag
gactacaagaacaagcgtcgcatctcgatcgagccggcagcggaaggtgtcgatccggtc
gaatacatggtgccgaaaggcaagcacatcccggtgcaggaaggcgacttcgtgcagaag
ggtgagtatatcatggacggcaacccggccccgcatgacatcctgcggatcatggggatc
gaggcgctcgccgattatctgatcgacgaggttcaggacgtctatcgtctgcaaggcgtg
aagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaagatcgagatc
ctcgacagcggcgacaccacgctgctgaagggcgagcatgtcgagcgtgacgagttcgag
gaagagaacgccaagatcaccgccaagggcggccgccccgccacgggcgagccggtcctg
ctggggatcaccaaggcatcgctgcagacccgcagcttcatcagcgccgcctccttccag
gagacgacgcgcgtgctgaccgaggccgccgttcagggcaagcgcgacaagctcgtgggc
ctgaaggaaaacgtcatcgtcggccggctgatcccagcgggcaccggcggggcgacgatg
cggatgcgcaagatcgcgtcggaccgcgacgccgaggtgatcgagtcgcgccgggccgag
gcggaggcggcagccgccgcgctcgagccgccggccccgaccgaggccgccgagccggca
ccggtcccgtcggacgagtga
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integrated database retrieval system
