Paracoccus jeotgali: CYR75_02535
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Entry
CYR75_02535 CDS
T05276
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paru
Paracoccus jeotgali
Pathway
paru03410
Base excision repair
paru03430
Mismatch repair
paru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYR75_02535 (recJ)
03430 Mismatch repair
CYR75_02535 (recJ)
03440 Homologous recombination
CYR75_02535 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paru03400
]
CYR75_02535 (recJ)
DNA repair and recombination proteins [BR:
paru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CYR75_02535 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CYR75_02535 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CYR75_02535 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AUM73316
UniProt:
A0A2K9ME73
LinkDB
All DBs
Position
complement(503840..505579)
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AA seq
579 aa
AA seq
DB search
MTSFLNVERSLTGRRWVGPDDAMTRRAEALAQASALPLPVARILAERGIEAPEAPGFLAP
TLRDMLPDPETLRDIGPAAERLVSAATGRERIAIFADYDVDGGASAALLLDWLRQLGHRA
TLYIPDRIDEGYGPNAPSIAALARDHDLIVCVDCGTLSHDALAAGRGTDIIVLDHHLGAE
TLPPAMAVVNPNRQDEDGTLGHLCAAGVVFLTLVQAGRVLRKQGAPEPALLPMLDLVALA
TVADVAPLTGVNRAFVRQGLAIMARRSRPGLAALSDVARLDTAPSSFHLGFVLGPRVNAG
GRVGRADLGALCLSATDADEARRLALALDELNRDRRAIEAAVRDEALSQVEARGDTALAW
AAGDGWHPGVVGIVAARVKERSGLPAVVIGVEGGIGKGSARSVDGVDLGQAVQRLAAEGL
LLKGGGHRMAAGLTVAQEAIPAAMARLAELIGPQMAQRRLLADLRISGLIEPAAATPELL
EMIDSAGPFGQAAPAPRFAFSDLILDSASAMGENHLRASFRAAGQKPLEAVAWGAMDGEL
GPALLTARGRRFHAAGKLELSHWGGRARVRLRLDDVAAL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtttcctgaatgtcgaacgctcgctgaccggacgccgctgggtcgggccggac
gacgccatgacccgccgcgccgaggcgctggcgcaggcctcggccctgccgctgccggtc
gcccgcatcctcgccgagcgcgggatcgaggcgcccgaggcgccgggctttctcgccccc
accctgcgcgacatgctgcccgaccccgaaacgctgcgcgacatcggccccgcggccgag
cgtctggtcagcgccgcgacaggccgcgaacgcatcgcgatctttgccgattacgacgtc
gatggcggcgcctcggcggcgctgctgctggactggctgcgccagcttggccaccgcgcg
acgctgtatatccccgaccgcatcgacgagggctatggccccaacgccccctccatcgcg
gcgctggcccgcgaccatgacctgatcgtctgcgtcgattgcgggacgctgtcgcatgac
gcgctcgccgccggccgcggcaccgacatcatcgtgctggaccaccatctgggcgccgag
acgctgccgcctgcgatggccgtcgtgaacccgaaccggcaggatgaggacggcaccctc
ggccatctctgcgccgccggggtggtcttcctgacgctggtgcaggccgggcgcgtgctg
cgcaaacagggcgcgcccgagcccgcgctgctgccgatgctggatctggtggcgctggcg
acggtggcggacgtggcgcccctgaccggcgtcaaccgtgcctttgtgcggcaggggctg
gcgatcatggcgcggcgctcgcgtccggggctggcggcgctgtccgatgtggcccggctg
gacaccgcgccatccagctttcatctgggcttcgtgcttggcccccgcgtcaatgccggg
gggcgggtcggccgcgctgatctgggcgcactctgcctctcggccaccgacgcggacgag
gcgcggcgtctggcgctggcgctggacgagttgaaccgcgaccgccgcgccatcgaggcc
gccgtccgcgacgaggccctgtcgcaggtcgaggcgcgcggcgacaccgcgctcgcctgg
gccgcaggcgatggctggcaccccggcgtcgtcggcatcgtcgcagcgagggtcaaggag
cgcagcggcctgcccgccgtggtgatcggggtcgagggcggcatcggcaagggctcggcg
cggtcggtcgacggggtcgatctgggtcaggcggtgcagcgcctcgcggccgaagggctg
ctgctgaagggcggcggccaccgcatggccgcgggcctgaccgtcgcccaagaggcaatc
cccgccgccatggcgcgtctggccgagctgatcggcccgcaaatggcacagcgccgcctg
ctggccgatctgcgcatctcgggcctgatcgaacccgccgcggcaacacccgaactgctc
gagatgatcgactccgccggaccgttcggacaggccgccccggccccgcgttttgcgttt
tcggacctgattctcgacagcgcctcggcgatgggcgagaaccacctgcgcgccagcttc
cgcgccgccggtcaaaagccgctggaagcggtggcctggggcgcgatggacggagagttg
ggcccggcgctgctgaccgcccgaggccgccgctttcacgccgcaggcaagctggaactg
tcgcattggggcggccgcgcccgcgtccgcctgcgccttgacgacgtcgccgcgctgtaa
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