Paracoccus jeotgali: CYR75_11550
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Entry
CYR75_11550 CDS
T05276
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
paru
Paracoccus jeotgali
Pathway
paru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYR75_11550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paru03019
]
CYR75_11550
03009 Ribosome biogenesis [BR:
paru03009
]
CYR75_11550
Enzymes [BR:
paru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CYR75_11550
Messenger RNA biogenesis [BR:
paru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CYR75_11550
Ribosome biogenesis [BR:
paru03009
]
Prokaryotic type
rRNA processing factors
CYR75_11550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AUM74826
UniProt:
A0A2K9MIG7
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All DBs
Position
complement(2369797..2372586)
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AA seq
929 aa
AA seq
DB search
MAKKMLIDATHPEETRVVVVDGTKVEEFDFETVNKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPAADRQALLDEDRANAEAAEAEETARENGSSRRSRRPAR
AEKADKRDPAVSSDDVPGMQVVDPGAEDSAPVEGAEDGDSADDRNGDDSRHDGGKGDRGR
GRDNADQKDDSIESVADEDVTEEINPPRKARARRYKIQEVIKVRQIMLVQVVKEERGNKG
AALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKEIAGELRVPQGAGLIIRTAG
SQRTRTEIKRDYEYLMRLWEQIRELTFASVAPAPIYEEGDLIKRTIRDLYSREIDEVLVE
GERGYRVAKDFMKMIMPSHARNVKHYTDQMPLFARYQVEGYLAGMFNPVVQLKSGGYIVI
GVTEALVAIDVNSGRATKEGSIEDTATKTNLEACDEVARQLRLRDLAGLIVIDFIDMDER
KNNAAVEKRLKDRLKTDRARIQVGRISGFGLMEMSRQRLRPGMLESTTQPCAHCHGTGLI
RSDDSLALTILRAIEEEGTRKRTREVLVKAPVAVANFLMNAKREHIATIEARYGMSVRVE
ADPVLISPDFAVEKFKTATRQVAEVTSPVVSATAQLMAQIDDDDETDLEDEDDTATAENG
DQDSDDSGDDSESGRENGDGSRSKRRRRRRRGGRSRGDGENGNGSDQDCDDNGDDSDETE
NGDSRDGAAREVADSDAGTEAKAKADSKPAAKAEPQPSRSRSRTRTRPTSKAATDAQTQS
ADDSDKADEGKRGEDAAQTDAVSAPERDDREQAASVKEAASTDAKPEAAEDKPADAAPKA
QQADDTPAASEAEESAKPDAELAVEENASTDAEPEAADSAEADAEAEAADSAEAATGDGV
KPEHMAEADEPAEADQSSQPKRRGWWSVG
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaatgctgatcgacgcgacgcatcccgaggaaactcgggtcgtcgtggtg
gacggaaccaaagtcgaggaatttgatttcgagacagtcaacaagcgacagcttgctggc
aatatctacctggcaaaggtgacgcgggtcgaaccctcgctgcaggccgcctttgtggat
tacggcggaaaccggcatggtttcctggccttcgcggaaattcaccccgattactaccag
atccccgccgccgaccgtcaggcgctgctggacgaggatcgcgccaatgccgaggccgcc
gaggccgaggaaaccgcccgcgaaaacggctcgtcgcgccgctcgcgccgccccgcgcgg
gccgaaaaggccgacaagcgcgatcccgccgtctcgtccgacgatgtgccggggatgcag
gtcgtcgatcccggcgccgaggattcggccccggtcgaaggcgccgaggatggcgattcg
gctgacgaccggaatggcgacgactcgcgccatgatggcggcaagggcgaccgcggacgc
ggccgcgacaatgccgaccagaaggatgacagcatcgaatcggtcgctgacgaagatgtg
accgaagagatcaacccgccgcgcaaggcccgcgcccgccgctacaagatccaggaagtg
atcaaggtccggcagatcatgctggtccaggtggtcaaggaagaacgcggcaacaagggt
gcggcgctgaccacctatctgtcgctggccgggcgttactgcgtgctgatgcccaacacc
gcgcgcggcggcgggatcagccgcaagatcaccaacgccgccgaccgcaagaagctgaag
gaaatcgcgggcgagctgcgcgtgccgcagggcgccgggctgatcatccgcaccgccggc
agccagcgcacccggaccgagatcaagcgcgactatgaatatctgatgcggctgtgggag
cagatccgcgagctgacctttgcctcggtcgcgccggcgccgatctatgaggaaggcgac
ctgatcaagcgcacgatccgcgacctctacagccgcgagatcgacgaggtgctggtcgag
ggcgagcgcggctaccgcgtcgccaaggacttcatgaagatgatcatgccgtcccacgcc
cgcaacgtgaagcactataccgaccagatgccgctgttcgcgcgctatcaggtcgagggc
tatctggcgggcatgttcaacccggtcgtgcagctgaaatccggcggctatattgtcatc
ggcgtgaccgaggcgctggtcgccatcgacgtgaactcgggccgggcgaccaaggaaggc
tcgatcgaggacacggcgaccaagaccaacctcgaagcctgcgacgaggtggcgcggcag
ctgcgcctgcgcgacctggccgggctgatcgtcatcgacttcatcgacatggacgagcgc
aagaacaacgccgccgtcgaaaagcggctgaaggatcggctcaagaccgaccgggcgcgg
attcaggtcggccgcatctcgggctttggcctgatggagatgagccgccagcgcctgcgg
ccggggatgctggaatcgaccacgcagccctgcgcgcattgccacggcacagggctgatc
cggtccgatgacagccttgcgctgaccatcctgcgcgccatcgaggaagagggcacccgc
aagcgcacccgcgaggttctggtcaaggccccggtcgcggtcgcgaacttcctgatgaac
gccaagcgcgagcatattgccaccatcgaggcacgttacggcatgtcggtccgggtcgag
gctgatccggtgctgatctcgcccgatttcgcggtcgagaagttcaagaccgccacgcgg
caggtggcagaagtcaccagccccgtcgtctcggccaccgcgcagctgatggcgcagatc
gacgatgacgacgagacggatctcgaggatgaggacgacacggctaccgccgaaaacggc
gatcaggacagcgacgattcgggcgatgacagcgagtcgggccgcgagaacggcgatggc
agccgcagcaagcgccgccgccgccgccgtcgcggcggtcgcagtcgcggcgatggcgag
aacggcaatggcagcgatcaggactgcgacgacaatggcgacgacagtgacgagaccgag
aacggcgacagccgtgacggtgccgcgcgcgaggtagctgacagcgacgcggggaccgag
gccaaggccaaggccgacagcaagcctgccgccaaggccgagccgcagccctcgcgcagc
cgcagccgcacccggacccgcccgaccagcaaagccgcgacggacgcgcagacgcaaagc
gcggatgatagcgacaaggcggatgagggcaagcgtggcgaggacgcggcgcagacggac
gctgtgtcggcacctgagcgtgatgaccgcgagcaggcggcttcggtgaaggaagcagct
tcgaccgacgccaagccggaggcggccgaggacaagcctgccgacgctgcgccaaaggcg
cagcaggcagacgatacgcccgccgcttcggaagccgaggaaagcgccaagcctgacgcc
gagcttgcggtcgaagagaacgcctcgaccgacgctgaacccgaggccgctgacagcgcc
gaagccgacgccgaagccgaggccgctgacagcgccgaggccgccacaggcgacggggtc
aagccggaacacatggccgaggccgacgagcccgccgaggccgatcaatccagccagccc
aagcggcgcggatggtggtcggtcggctga
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