KEGG   Phalacrocorax aristotelis (European shag): 142049091
Entry
142049091         CDS       T11493                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
parx  Phalacrocorax aristotelis (European shag)
Pathway
parx04145  Phagosome
parx04514  Cell adhesion molecule (CAM) interaction
parx04672  Intestinal immune network for IgA production
parx05164  Influenza A
parx05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:parx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    142049091
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    142049091
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    142049091
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    142049091
   05168 Herpes simplex virus 1 infection
    142049091
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:parx04147]
    142049091
Exosome [BR:parx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142049091
  Exosomal proteins of epithelial cells
   142049091
  Exosomal proteins of breast milk
   142049091
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 ig Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 142049091
NCBI-ProteinID: XP_074932642
LinkDB
Position
31:471509..474842
AA seq 268 aa
MAGHPRAHPAVLVLLGLALGARGAGAFLVHVTSSCPLAANGSLLDFEFTLIFNKNPLVCY
DPDARRFVACDWGLLHEVAGLVASTLNNGTAWVERAEARRQACRNLAPHFWASTALRQTP
PQARIISTETRNARAPILLTCHVWGFYPPEVTVIWLHNGDIVDPGDHSPISAIPNGDWTY
QTQVTLMVAPVAGDTFTCSVQHVSLVHPLLEDWGPSLSPGLKLKVAAATVVMALGLSFFI
AGVYHYWKRPPAPGYTPLPGDNYPAGSI
NT seq 807 nt   +upstreamnt  +downstreamnt
atggctggacacccccgggcccaccccgccgtgctggtgctgctgggcctggccctgggt
gcccggggggcaggtgccttcctggtgcacgtgaccagctcctgcccgctggcggccaac
ggctccctgctggattttgagttcaccctcatcttcaacaagaacccgctggtctgctac
gaccccgacgcccggcgcttcgtcgcctgcgactgggggctgctccacgaagtcgccggc
ctggtggcctccaccctcaacaacggcaccgcctgggtggagcgcgccgaggcccggcgc
caggcttgccgcaacctggccccccacttctgggcctccacagcgctgcggcagacgcca
cctcaagcccgcatcatctccactgagacgagaaacgcccgggcacccatcctcctcacc
tgccacgtctggggcttctatccccccgaggtgactgtcatctggctgcacaacggggac
atcgtggaccctggtgaccactcccccatctctgccatccccaatggtgactggacctac
cagacgcaagtgaccttgatggtggccccggtggctggggacaccttcacgtgctcggtg
caacacgtcagcctggtgcatcccctcctggaggactggggccccagcttgtccccaggg
ttgaagttgaaggtggctgcagccaccgtggtgatggcgttggggctcagcttcttcatc
gccggcgtctatcactactggaagaggccaccggcaccgggttacactcccctccccgga
gacaactaccccgcaggcagcatctga

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