KEGG   Phalacrocorax aristotelis (European shag): 142049766
Entry
142049766         CDS       T11493                                 
Symbol
TPM4
Name
(RefSeq) tropomyosin alpha-4 chain isoform X1
  KO
K10375  tropomyosin 4
Organism
parx  Phalacrocorax aristotelis (European shag)
Pathway
parx04260  Cardiac muscle contraction
parx04261  Adrenergic signaling in cardiomyocytes
parx04814  Motor proteins
parx04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:parx00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    142049766 (TPM4)
   04820 Cytoskeleton in muscle cells
    142049766 (TPM4)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    142049766 (TPM4)
   04261 Adrenergic signaling in cardiomyocytes
    142049766 (TPM4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:parx04812]
    142049766 (TPM4)
Cytoskeleton proteins [BR:parx04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     142049766 (TPM4)
SSDB
Motif
Pfam: Tropomyosin CLZ CEP135_TSGA10_CC CCDC39 HmpF Laminin_I Rod_CreS ATG16 PUMA_CC CCDC170_1st Sec2p CC_Bre1 ERM_helical TMF_DNA_bd Pex17 Exonuc_VII_L CRWN_N CENP-F_leu_zip Nuf2_DHR10-like Mce4_CUP1 PspA_IM30 Lebercilin FPP ADIP DUF1664 HAUS1 DUF3450 DUF745 LEKR1 GAS DUF4200 CLIP1 FKBP15 CCDC170_2nd Uds1
Other DBs
NCBI-GeneID: 142049766
NCBI-ProteinID: XP_074933802
LinkDB
Position
W:complement(5023347..5033384)
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQVEDELVALQKKLKGTEDELDKY
SEALKDAQEKLEQAEKKATDAEGEVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAELSEVKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILSDKLKEAETRAE
FAERTVAKLEKSIDDLEEKLAQAKEENLGLHQTLDQTLNELNCI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaagctatcaagaaaaagatgcagatgttgaagttagacaaggagaatgccattgac
agagcagagcaggctgaaacggataagaaggcagcggaggacaaatgcaaacaggtagag
gatgagctggtagctctgcagaagaagctgaaaggaactgaagatgagctggataagtac
tcggaggctctcaaagatgcccaggaaaaactagagcaggctgagaagaaagccactgac
gctgaaggtgaggtggcagctctgaacagacgtatccagctcgtggaagaggagttggat
cgtgcccaggagcggctggccacagccttgcagaaactggaggaggctgagaaagcagcg
gatgagagtgagagaggaatgaaggttattgagaacagagcaatgaaagatgaagagaaa
atggaaattcaggaaatgcagctgaaggaggcgaagcacattgctgaagaagctgaccgc
aaatacgaggaggttgcccgtaaactggttattttggagggtgagctggaaagagctgaa
gagcgtgcagagctgtccgaagttaaatgtagtgaccttgaagaggagttaaagaacgtc
actaacaacctgaaatcgctggaagctcaatctgaaaagtactcggaaaaagaagataaa
tacgaagaagaaatcaagattctctctgacaagctcaaagaagctgaaactcgtgctgaa
tttgcggagagaacagttgccaaactggaaaagtctattgatgacctggaagaaaaactt
gctcaagcaaaagaagagaacttggggctgcaccagacactggaccagacgctaaacgaa
ctgaactgtatatga

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