Phalacrocorax aristotelis (European shag): 142058817
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Entry
142058817 CDS
T11493
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142058817 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142058817 (NUP210)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142058817 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_14th
Ig_NUP210_6th
Ig_NUP210_16th
Big_2
NUP210_Ig
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
142058817
NCBI-ProteinID:
XP_074952791
LinkDB
All DBs
Position
6:24712016..24785786
Genome browser
AA seq
1884 aa
AA seq
DB search
MAPPAPQALSLLLLLSLHLIASSKLNIPKVLLPFTRGTRVNFTLEANDGCYRWSSTRPEV
ASIELTDQDERQCSQKAVVQARSSQPTRLTSIIFAEDIMTGQVLRCDAIVDIIHDIQIVS
TTRELYLEDSPLELKIQALDSEGNTFSTLAGLVFDWTIVKDTEGDGFSDSHNALRILKFL
ESTYIPPSYISEMEKVAKQGDTILVSGMKTGSSKLKARIQESVYKHVPPAEVRLLILENI
LLNPAYDIYLLVGTSIQYRVQKIRQGKITELRMPSDQYELQLQNNVLGPDGDLSWPVAKL
DQATSVVTALQQGQTNLILGHKSIRMQGVSRLPNSTIYVVNPGYLGFTVHPGDRWVLETG
RLYEITIEVYDKSSNKVYLSDNIRINTKLSKEYFEVLKSSLNGSYHYVKAIKKGQTIIDA
ALTSIVDQDGGVHTLPVPVRNQQDVEIYVPIVLSPSILTFPWQPKVGVYQYTLQAHGGSG
NFSWSYSNQAVATVTVKGVMTTGSDIGVSVIQAIDVQNPLHYGEMKVYVTEPSGMEFTPC
QVEARVGQILELPLRINGLTNVETGETVPLSDCSHFDLVVEVENRGVFRPLQGRLKPTAD
FCSGVRVKAETQGYTALVVSYTHGHVHLSASITIAAYLPLKTIDPPSVALVTLGSSKDMV
FEGGPRPWVQEPSKFFRNITAEDAESIGLSLFGPPASRNNIQHWVRVSCKSLGEQVIALT
VGNNPTITNPFPAVEPAVVKFICAVPSRLTLTPVYGSPQLDLSCPLLQQNKQVVPVSNYR
NPVLDLAAYDQQGSKFDNFSSLNVIWESTKVSLANIEPDMPMELTLKEDGNGQKKMHGLQ
TVLVHHESGTTAISATATGYQQSHLKAAKVKIPYEPLLPVSASIELILVEDVKVSPSDVS
IYNHPDVQAELFIKEGSGYFFINTSVANVVRVAHEETQGIALVHPLLPGSVTVMIHDLCL
AFPAPAKAEIYVSDIQELYARVVDKVEIGKTVKAYVRVLDNSKNPFLAKYFAVMDLKLRA
ASQIVSLVPLSEALDDHTAAFLVHGVAIGQTSLMATVADKRGQRIDSAPQQIEVFPPFRL
LPRKVSLIIGAMVQITSEGGPQPQSNIIFSISDEKIASVNSTGLVRGVAVGNGTVTGVVQ
AVDAETGKLVVVSQDKVEVEVVQLTAVRIRAPITRMKTGTQMPVYVMGITSSQTPFSFGN
AVPGLTFHWSVTKRDILDIKTRHSEASFQLPAKYNFAVDAYGRVKGRTGLKVVVKVLDPA
ANQFYNMARELSDEIQIQVFEKLHLVTPEVEAEQILMSPNSFIKLQTNRDQVASLSYRVL
DGPDKVPVVKIDERGFLNSGSLIGSSTIEVISQEPFGINQTIVAAVKVYPISYLRISMSP
ILHTQNKEALLALPLGVTLTFTVHFHDNSGDTFHSHNSVLNFATNRDDFVQIGKGATNNT
FVIRTVNVGLTLLKVWDAEHSGIADYVPLPVQHAIFPELTDVVVGDVLCLSTSPINQEGL
PGIWSSSLSSVLQVDSKTGVAVARDSGVVTVYYEIPGLLKTYREILINIPQRTTAMHVSG
VKTNLQGVAASKVIVSIGEKNKNLKGECLPAQIEAIAELQPQSIINCHLDFNNDAFDFPA
HDIFITEPGFDAVSGHYTCSITMHRLTDKQLKHLSMSKTALRVTASIQGSHFSGEQISTE
VPFNPGFYADQTEMLLSNHYTSSDVKIFGATEILDTLEVKCGSPTVKAFEKEKSYGLPSY
VVYTVSLSDPRVSSQGIVSTTLTISSPMTDQSITIPVTVIYLTDKTSAPVRHGASLFQHF
LDSYQVMFFTLFALLAGTAVMIIAYHAVFSPKEQHSHPAFTPRTTPQHSHNSFSVSPALS
FTPQSSSRKTSPSSMLWSTDYGSR
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggctccccccgcgcctcaggcgctgtctctcctcctcctcctttccctccacctcatc
gcctcctccaaacttaacatccccaaggtgctgctacccttcacccgcggcacccgtgtc
aacttcacgctggaggccaacgacggttgctaccgatggtcctccaccaggccggaggtt
gcgagcatagagctgacagatcaggatgagcgccagtgttcacagaaagctgttgtccag
gcacggtcctcacagcccacacgtctgacaagtatcatctttgctgaagatataatgact
ggacaagtgcttcgttgtgatgctatagttgatataattcacgacatccaaattgtgtcc
acaacaagagaactctatcttgaagactcaccactggagctaaaaattcaggctttggat
tctgaaggaaatactttcagcacactggcagggttagtctttgactggacaatagtaaaa
gacacagagggtgatggcttctcagattcccacaatgcattacgtatactcaaattctta
gaatccacttatattccaccttcctatatatcggagatggaaaaagttgccaagcaagga
gataccattttggtgtctggaatgaaaacaggcagttctaaattaaaagcaagaatacag
gagagcgtctataagcatgtacctcctgcagaagtcagattgcttattttggaaaatatc
cttttaaatccagcatatgacatttatcttctggtaggaacatcaattcagtacagagtt
cagaaaataaggcaagggaagattacagaattaaggatgccatctgatcagtatgaactg
cagctacagaacaacgtactaggtcctgacggagatctgtcttggccagttgccaagttg
gaccaggcaacatcagttgtaacagcactgcagcagggacagactaacctcatacttggg
cacaagagtattcgcatgcaaggggtttccagactaccaaacagcactatctatgttgta
aatcctgggtacttagggtttacagttcatccaggtgacagatgggtcctagaaacaggc
agactttatgaaattacaattgaagtgtatgataaatcaagcaataaggtgtatttatct
gataatatcagaattaatacaaagctctccaaagaatattttgaggtgctgaagtcatct
ctgaatggatcatatcattatgtgaaagcaataaagaagggtcagaccattattgatgct
gcactgacatcaatagtagatcaggatggaggtgttcatacgttaccagttccagtgcga
aaccagcaagatgttgaaatatatgttcccatagttctttcacccagcattttgactttt
ccttggcagccaaaagtaggggtctaccagtacaccttacaggcacacggtggaagcgga
aatttcagctggtcctattctaaccaggcagttgctacagtgacagtcaaaggagtaatg
acaactggaagtgatattggcgtcagtgttattcaggcaattgatgttcagaatccattg
cattatggagaaatgaaggtgtacgtaactgaacctagtgggatggagttcacaccatgt
caagttgaagcacgtgttggccaaatattggagctgcccttgaggattaatggcctaaca
aatgttgaaacaggcgagacagtcccactgagtgactgctcacactttgatctagttgtg
gaagtagaaaaccgtggtgtgttcaggccacttcaaggaaggcttaagccaactgctgat
ttttgtagtggagtgagagtgaaagctgaaactcaaggatacacagcacttgttgttagt
tacacccatggtcatgtccacctcagtgctagcatcaccattgctgcttatctaccgtta
aaaactatcgatcctccatccgttgctttagtgactttgggttcctctaaagatatggta
tttgaaggaggacctagaccgtgggtacaagaaccttcaaagttcttcaggaacatcact
gctgaggatgcagaaagtattggtctgtctttatttggacctcccgcatctcgaaataac
atccagcattgggttagagtgtcttgcaaaagcctgggagagcaagttattgctttaaca
gttggaaacaaccccacaatcaccaacccttttccagcagttgagcctgctgttgtgaag
ttcatctgtgctgtcccttcacgactcactttgactcctgtttatggaagtcctcagctt
gatctctcctgccctttgctgcaacaaaacaagcaagtggttcctgtttcaaattatcgc
aatccagtattggatttggctgcgtatgaccaacagggcagtaaatttgataacttcagt
tctcttaatgttatctgggaatcaacaaaagtgtccttagctaatattgagcctgatatg
ccaatggagctgactctgaaagaagacggaaatggtcaaaagaaaatgcatggcttacaa
actgttctagttcatcatgagtctggtacaactgccatctctgcaactgcaacaggatac
cagcaatcccatctcaaggcagccaaagtaaaaataccgtatgaacctcttctaccagtg
tctgccagtattgaactgatactagtggaagatgtaaaagtgagcccttctgacgtctcc
atttacaatcacccggatgtacaggcagaacttttcatcaaagaaggttctggatatttt
ttcattaataccagtgttgcaaatgttgtaagagtggctcatgaggaaactcagggtatt
gctttggtgcatcctctgcttccaggatcagtgactgtaatgattcatgacttgtgtttg
gctttccctgcaccagctaaagctgaaatttatgtatctgatatacaggaactgtatgcc
cgagttgttgacaaggtggagattggaaaaacagttaaagcttatgtcagagttctggat
aactctaagaatccttttctggctaaatactttgctgtcatggacctaaaactaagggca
gcatctcagattgtttcacttgtcccactcagtgaagctcttgatgaccatactgctgct
tttctagtgcatggtgtggccattggtcagactagtcttatggcaaccgttgctgacaaa
agaggacaaagaattgactctgctccacaacagattgaagtctttcccccatttagacta
ctgccaaggaaagtgtccttaattattggagccatggttcagatcacgtcagaaggaggc
cctcaacctcaatccaacataattttctccatcagcgatgagaagattgcatcagtgaac
agcactggacttgtcagaggagtggcagttgggaatggaacagtaacaggagttgtgcaa
gctgttgatgcagagacagggaagcttgttgtggtgtctcaggacaaagtggaagttgaa
gtagtacagctgacagctgttagaattcgtgcacctattacacgaatgaaaactggtaca
cagatgccagtttatgtcatgggcatcaccagtagtcagactcctttttcatttggcaat
gcagtaccggggttaacgttccactggtctgtcacaaagagggatattctggatatcaag
acaagacacagtgaggcttcttttcagcttcctgcaaaatataactttgcagtggatgct
tatggcagagtaaaaggaagaacaggcctgaaagttgttgttaaggtccttgatccagca
gccaaccagttttacaacatggcaagagaactgtccgatgaaatccaaattcaggtgttt
gaaaaacttcatctagtcactccagaagtagaagcagagcagattttaatgtcaccaaat
tcctttattaaacttcagacgaacagggaccaagtggcttcactgagctaccgtgtcctg
gatggaccagataaagttcctgttgtaaaaattgatgagagaggtttccttaactctggg
tctttgataggatcatcaacaattgaagtgatttcacaggaaccatttgggatcaaccag
accattgtagctgctgttaaggtctaccccatctcatatctaagaatctccatgagtcct
attctgcacacgcaaaacaaagaggcattattggctctccccctgggtgtgacattgact
tttacagtccattttcatgataactctggagatacttttcattcgcataattctgtgctc
aactttgcaacaaacagagatgactttgtacagattgggaaaggagccacaaacaacaca
tttgtaatccggactgtaaatgtaggtttaaccttgcttaaagtctgggatgcagaacac
agtggaattgcagactatgtcccacttcctgtgcaacatgccatttttcctgagctcaca
gatgtggtggtaggtgatgtcctctgtttgagtacttcaccaataaaccaggaaggcctg
ccaggcatatggagctcctcattaagtagcgttcttcaggtcgactccaagactggtgta
gcagtggcaagggattctggtgttgtcactgtctattatgagattcccggcttacttaaa
acctacagagagatattgattaatatacctcagaggactacagcaatgcatgtaagtgga
gtgaaaacaaacttacaaggagttgcagcctccaaagtgatagtttcaattggggaaaaa
aataaaaatttgaaaggggagtgcttgcctgctcagattgaagccattgctgaattacaa
ccacagtccattatcaattgccatctagattttaacaatgatgcatttgacttcccagca
catgatatttttataacagaacctggatttgatgccgtttcaggacattacacctgttcc
atcacaatgcacaggcttactgacaagcagctgaagcacctcagtatgagtaaaactgca
ctcagagttacagcttcaatccaaggcagccacttctctggggagcagatcagcactgag
gtgccattcaatcctggcttttatgctgaccaaacggaaatgcttttaagtaaccattac
acaagctctgatgtgaaaatatttggtgccactgaaattcttgataccctggaggtgaaa
tgtgggtcaccaacagtgaaggcgtttgagaaagagaaatcctatgggctgcctagttac
gtagtctacaccgttagtctgtctgatccaagagtttcaagccagggaatcgtatcgacc
actctaaccatctctagtcccatgactgaccagtctatcactatcccagtgacagtgatt
tacttgactgacaaaaccagtgcaccagtgagacatggagccagtctattccagcacttt
cttgattcttatcaagtgatgttcttcacgctttttgcactattagcagggacagctgtt
atgattatagcctatcatgcagttttctcaccaaaagaacagcacagtcatccagcattt
accccaaggacaactcctcaacacagccataacagtttctctgtatcacctgcactttcc
ttcactcctcagtcctcaagcaggaaaacaagcccatcgtcgatgctctggagcactgat
tatggttcacgttag
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