Phalacrocorax aristotelis (European shag): 142060260
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Entry
142060260 CDS
T11493
Symbol
TTC3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142060260 (TTC3)
Enzymes [BR:
parx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142060260 (TTC3)
Ubiquitin system [BR:
parx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142060260 (TTC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
TPR_1
zf-RING_2
TPR_BSK1_C
TPR_2
zf-C3HC4_2
TPR_11
zf-C3HC4
zf-rbx1
TPR_17
TPR_12
TPR_16
zf-RING_UBOX
TPR_8
WHD_Egal
zf-ANAPC11
TPR_19
CARD
ANAPC3
zf-RING_11
zf-C3HC4_4
PAM2
zf-RING-like
zf-Nse
YjbH
Motif
Other DBs
NCBI-GeneID:
142060260
NCBI-ProteinID:
XP_074956313
LinkDB
All DBs
Position
1:complement(101012447..101075309)
Genome browser
AA seq
1974 aa
AA seq
DB search
MGEPISESEFAALAFYAGDKSCCELGHGVFVQRLPHKPKTDVDPCEVWCSQPVDILREYC
NIIRIRIFWPLLFKSESNSLVADWSSSQILDQNWKRLCDLEVLEDLVDLIKGVVNVPPFI
GGILRIGSRIENGVFDVGDALDWVRYTGDGSILQRLEKLGDFGWIYLEIFFAECKRYITK
VALEDCNLVEEFKAVTCENCRKNSESMKQKGNEEFSQGNFDRAIMSYTKAIEFCPANHLL
YGNRALCLILTGQYKRALADGKRATILKPNWPKGHYHFCKALSLLGEHELALEANERAQE
LCKNILDGLKDLVQQNDKLKKTLEEINGIKQHKQKPKKSLLEKKDCSSSESHLIISQELK
EVEKEVKRTQSDPKDHHCRQKQDTRVTDIQRTESKCSSPEFPPSQSHQNKGRPKTKPGDS
EKTRDRLDLKVESKAIQDKLFCTVQQVDFTMLPEAVKSLVHDGYTALMDQRCHSAEQAFS
QLLSMLKPSELKQLNLRIINYVVIIYGHATALLGIGQPEALTKAEVQFKKIIEQYQEERF
SCLAYYGIGKVYLRQNRFSDALDQFMKSQTMVNHKIVPGVLTWPTSSQVIEETRTENLQL
ILKNCIEECKFPPEPDAICRYQQCHGHSKIQIYFTDPDFKGFIRITCCQQCRVEFHISCW
KKLKTTNYSDKNDKDFLQELCFTPDCTGLISKIVIFSSSGLVKCEFEQKITKTKEPPRAC
IKQKCSSLRKLKMKREKKLRRKRAREEAQNSAKKKIEENQMGNEPSQYKHHSGYVQDLYA
GDRVLQHISRNAEQIKTAVGDASKLLKELLSWFVISEEDYMSYSKTSSMSHEVMEQLISY
LIHEKNRVKTRAFIHVLSELEEVDPKLHKWLKHLNNLGLTATKNFLLQYGQFLKELDLSI
LTTLWNEKYGSKFDHVTTSSEDKEIRDYFLKPPLEKTRCFIWLLEDNRENFPFLHEALDE
FFDKMDDPTIILKKQGNENSSTNGIKVKNKNRKKNSKDSRSILVLSSGVSTAPREEDNIF
IEENTLDFTNSYEPFVIPEYLRGQLEEFEALCDISNSNSYQRLLDNSSDQTCESLYEYFS
QILEKHGPMEISNELLVGEYEHFPEEVRKIVEDEGGLKSFLLKSRHFIMVDNLVGLRKHA
VFSKENTNRNETGDNEIKNDRVCDVQEKSSQNKLQLNPAAKEFKPLSYPKQPHILTSTDL
TVAGYEVPQYLSWAFPTSHKWVHSLHSQNIDTTENQSSFSDILVKCFDSQNPGIFLPQTS
WRYPYERILPVPSQMPLISNVAEQPSYIYADHVAHQDNDKSAISDRKYVFSSSIPTEIQT
HEDPQCQLENSDKTFYEDSFDAADSKNEAECGIQVKTEKESRGIPLMKNNPHTRMIAVQV
NCEVADRETNTLPFHPFEVQQGDSLRMEKEHQVLKEQLKEAQEKYEQLQNRSSAEIGALE
ELLKKSVEETEVSKNELDWLHQDLEVKVKKWQQEKKEDQDNLKSLRNTVKKNTDANDRYS
KAIDEKEKQYNICLNTYLETSNKFANEKGKLEELVKKSQDDCQECVTRAVKAEISVLKNW
KETEVYKLSGAAANAEANLKVLKSLSSSSASAASKLKSQIDSWEIFISNVKKQLEKVEAE
YEEKIQMVKNGVRNCLTKLETVEFSSPPSILTKQGGPPAGDPAIVLCSSASAHPNVLPAF
SNSEDQGPAHASLNTQAGVKPAYANSKACSTSGGSVKTHSKPLEVLYSDKVLASCPSGIS
GSNTPNAQPDQAHQDDSAVRLRPSGLPSNKTVPKAFENIIVHLQSIFPNYSSSDFTSFIK
DVQRRNGNTLSGLSFDEVLSRVTELILDQQSKAPPSPGRPAKSVSSASPAQTGTRSREVP
AEENVPSPRKARPAHKNASSKNPSQPSLQPWGNVGATPKSKWKKLDYSASGDDPCTICHD
ELSRDSCELECGHRFHRECIRTWLKQHSSTCPICRVHALLPEDFPELPARNKHA
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacctatatccgaatctgagtttgcagccttggctttttatgcaggtgataaa
tcttgctgtgaattgggtcatggagtgtttgtacagcggttgccgcataagccaaaaaca
gacgttgatccctgtgaagtgtggtgcagtcagccagttgacatactaagagaatattgc
aacattattagaatacgtatcttttggcctcttctcttcaaaagcgaaagtaattctttg
gttgctgattggagcagttcacagattttagaccagaattggaagagactctgtgattta
gaagttttggaagaccttgttgatttaattaaaggagttgttaacgttccaccttttatc
ggtggcatactgagaattggcagcagaatagaaaatggtgtctttgatgttggggatgcg
cttgattgggtcagatacacaggtgatggcagtattctgcagagactggagaaacttggt
gattttggttggatctatcttgaaattttctttgctgaatgcaaacgttacattactaaa
gttgctttggaagattgtaatttagttgaagaatttaaagctgtgacctgtgaaaactgt
aggaagaacagtgaatctatgaaacagaaaggaaatgaggaattttcccaaggaaacttt
gatcgtgctataatgtcatatactaaagccatagagttttgtcctgcaaaccatcttctg
tatggaaaccgagctctctgtttaattctcacggggcagtacaagagagcccttgctgat
ggaaaaagagccactattttgaagcctaattggccaaagggtcactaccacttctgtaag
gcgctttcattactgggggaacatgaactggctttggaagctaatgagagagctcaggaa
ctatgcaagaatattctcgatggacttaaggatcttgttcaacaaaatgacaagttaaag
aagacgttagaagaaatcaatggtattaaacaacataaacagaaaccaaagaagtcactt
cttgagaaaaaagactgcagttcttcagaatctcatttaataatctctcaagaacttaaa
gaagtagaaaaagaggtaaagagaacacagtctgatcctaaagatcatcattgtcgtcaa
aaacaggataccagggtgactgacatccaaagaacagaaagcaaatgttcgtctccagag
tttccaccaagccaaagtcatcaaaacaaaggaaggccaaaaaccaaacctggtgactct
gaaaagacgagagatcgccttgatttgaaggtagagtctaaagccatccaagataaactc
ttctgtactgtgcaacaggtggattttactatgttgccagaagcagttaagtcccttgtt
catgatggttacacagccttgatggaccagcggtgtcacagtgctgaacaagccttttca
caattgttaagcatgctaaaaccttcagaattaaagcaactgaatcttcgtattattaat
tatgttgtaatcatctatggacatgccactgctcttcttggaataggacagcctgaggca
ttaacaaaagctgaagtccagtttaagaaaataattgaacagtaccaggaagaacgattt
agttgtttggcatactatggaattggaaaagtatacctcaggcaaaacagattttcagat
gcgcttgatcagttcatgaaatcacaaacaatggttaatcacaagattgtacctggagta
ttaacttggcccacatcttctcaggtcattgaagagacacgaacagagaacctacagttg
attttaaagaattgtattgaggaatgcaagttccctccagaaccagatgcaatttgtcga
tatcagcaatgccatggccactccaaaatccaaatatattttacagacccagactttaag
ggttttatacgtattacttgctgtcagcaatgtagagtggagtttcatatcagctgttgg
aaaaagttgaaaaccacaaactacagtgataaaaatgataaggattttcttcaggaattg
tgtttcactcctgattgtacaggccttatttcaaaaatagttattttcagttcttctggt
ctggtaaaatgtgaatttgaacaaaaaatcacaaaaaccaaggaaccaccaagagcctgt
attaaacagaaatgttcaagtcttaggaagttaaaaatgaaacgagaaaaaaaattacga
agaaaacgtgcacgagaagaggcacagaattctgctaaaaagaaaatagaagaaaaccag
atgggaaacgaaccatctcaatacaaacatcacagtggttatgttcaggatttgtatgct
ggtgatcgagtcctgcagcatatcagtcgaaatgctgagcaaataaaaacagctgttggt
gatgcttccaaactattaaaggaattactttcatggtttgtaatcagcgaggaggattac
atgtcatattccaaaactagcagcatgtcacatgaagtgatggagcagctcatcagttac
ttaattcatgaaaaaaacagagtaaaaacaagggcttttatccacgtgctgagtgagctg
gaagaggtggatcccaaattacacaagtggctgaaacatcttaacaacttgggtctgaca
gctacaaagaactttctccttcagtatggacaatttttaaaagagcttgacctttctatt
ttaaccacactctggaatgagaaatatggtagtaaatttgaccatgtgacaactagttct
gaagacaaagaaattcgtgattatttcttaaaaccacccctagagaaaacccgttgtttt
atatggctgttagaagacaacagagaaaattttccatttcttcacgaagctttagatgaa
ttctttgataaaatggatgaccctaccattatattaaagaagcagggaaatgaaaatagt
tcgactaatggtatcaaagttaaaaacaaaaataggaagaagaactcaaaagactcaagg
tctattttagtattatccagtggagtcagtactgcaccacgagaagaagataatatattt
atagaagaaaatactttagattttacaaattcctatgaaccgtttgtaatcccagaatat
cttcgagggcaactagaggaatttgaagctctctgtgacatttcaaatagtaacagctat
caaagacttttggataatagctcagatcaaacctgtgagagcttatatgaatatttctct
caaatcctggaaaaacatggccctatggaaatcagtaatgaattactagttggggaatat
gaacatttccctgaagaagttcgaaagattgtagaagatgaaggtggtctgaaatctttt
cttctgaaatcccgtcatttcattatggtggataatcttgttggcttaagaaagcacgca
gtttttagtaaagaaaatacaaacagaaatgagactggagataatgaaataaaaaatgat
agagtctgtgatgtgcaagaaaagtcttcccagaacaagctacagttaaatccagctgct
aaggaattcaaaccactgtcttaccctaagcaaccccatatattaacatctactgactta
acagtagcaggttatgaggttccacaatatttgtcctgggcttttcctacttcacataaa
tgggtgcattctttgcatagtcagaatattgataccacagaaaatcagtcgtcgttttca
gacattttagtaaagtgctttgattctcaaaatccgggtatatttttgcctcagacttcc
tggcgttatccatatgaaagaatattgccagtgccttctcaaatgcctctcatttcaaat
gttgccgagcaacccagttatatttatgctgatcatgtagctcatcaggataatgacaaa
tcagcaatttcagacagaaaatatgtcttcagcagttctataccaactgaaatccaaaca
catgaagaccctcagtgccagctggagaactcagataaaacattttatgaagacagtttt
gatgctgcagatagtaaaaatgaagctgaatgtggtatacaggttaagacggaaaaagaa
agcagaggtatacctctaatgaaaaacaatcctcatacaaggatgatagctgttcaggta
aattgtgaagtagctgatagggaaacaaataccttgccttttcatccatttgaagtgcaa
caaggagatagtctacgtatggaaaaagagcatcaggtattgaaagaacaactcaaagag
gcacaggaaaaatatgaacagttacaaaatcgaagctcggcagaaataggtgctttggaa
gagctcctaaaaaaaagtgttgaagagacggaggtatcaaagaatgaactggactggctt
catcaagacttagaagtaaaagtgaaaaaatggcaacaggagaaaaaagaagatcaagat
aacttaaaatcactaaggaacacggttaaaaagaatacagatgccaatgataggtattcg
aaggccattgatgagaaggaaaagcagtataacatatgtttaaatacgtaccttgagacc
agtaataaatttgctaacgagaaaggaaaattggaagagcttgtaaaaaagagtcaagat
gactgccaagagtgtgtgacaagagctgttaaagcagagatatcagtactcaaaaactgg
aaggaaacagaagtatacaagctaagtggtgcagctgccaacgcggaagctaatctcaag
gtgttgaagtcattaagcagcagctcagcttcagcagcatctaagttgaagtcacagatt
gattcttgggaaatatttatttcaaatgtaaagaaacaactggaaaaagtagaggctgag
tatgaagaaaaaattcagatggtgaaaaacggtgtacggaactgcctcactaaactggaa
actgtggagttttcttctcctccaagcatcttaacaaaacaaggcggacctccagctggt
gacccagccattgtcctgtgttcctctgcatctgcacaccctaatgtgcttcctgcgttt
tcaaattctgaagatcaaggtccagcacatgcttcacttaacacacaggccggagttaag
ccagcatatgcaaattctaaggcttgctccacaagtggcggatcagtgaaaacacactcc
aagccccttgaagtgttgtattctgataaagttttggcaagttgcccgtcagggatttct
ggaagtaatactccaaatgcccagccagaccaggcccaccaagatgactcagctgtacgc
ctgaggccttctggacttccaagcaacaaaacggttccaaaagcatttgaaaatattatt
gtgcatctacagagtatattcccaaactatagcagttcagacttcactagcttcataaaa
gatgtccaaagaagaaatgggaatacattgtcaggtttgagcttcgatgaagttctaagc
agagtgacagaactcattctggaccagcaaagtaaggcaccaccttcaccagggagacct
gcgaagtcagtgtcttctgcttcaccagcacagactggaactcggagtcgggaagtacct
gcagaagaaaacgtacccagcccccgcaaggcaagacctgcgcacaagaacgcctccagt
aaaaatccatctcagccaagtctccagccctgggggaatgtcggagcaacaccaaaatct
aaatggaaaaaactggactattcggcctccggtgacgatccttgcacaatatgtcatgac
gagctaagcagagactcatgcgaactagaatgtgggcatcgtttccacagagaatgcatt
agaacatggcttaagcaacattcgagtacctgccccatctgccgcgttcacgctctgtta
cctgaagactttcccgaacttcctgcacggaacaaacatgcctaa
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integrated database retrieval system
