Phalacrocorax aristotelis (European shag): 142062681
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Entry
142062681 CDS
T11493
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03320
PPAR signaling pathway
parx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
142062681 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
142062681 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142062681 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
parx03310
]
142062681 (NR1H3)
Transcription factors [BR:
parx03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
142062681 (NR1H3)
Nuclear receptors [BR:
parx03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
142062681 (NR1H3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
142062681
NCBI-ProteinID:
XP_074961541
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Position
10:complement(17654481..17685784)
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AA seq
409 aa
AA seq
DB search
MGPIQLSTQDHGKRVASVFEMEEEGLSLFPGSENPPEHAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYTCKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIRLKKLKKQEDDQARTVVVRPNPPNSPSPSHKLTPEQLSMIKKLV
AAQQQCNQRSFTDRLKVTPWPQVPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccattcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaggaagggctttcgctcttccctggctcagagaacccccctgagcatgcagaa
aatccccccctgaagcggaagaagggcccagcccctaagatgctgggaaatgaagtgtgc
agcgtgtgtggggacaaggcctccggcttccactacaacgtgctgagctgtgaaggctgc
aagggcttcttccgccgcagcgtcatcaagggtgcacagtacacctgcaagaatggtggc
aagtgtgaaatggacatgtacatgcgtcgcaagtgtcaggagtgtcgtctgcgcaagtgc
caggaggcaggcatgcgggagcagtatgttctgtctgaagaacagatccgactgaagaaa
ctgaaaaagcaggaagatgatcaggcgcggacagttgtggtgcgtccaaaccctccgaat
tcaccaagcccttcccacaaactgacgcctgaacagttgagcatgataaaaaagcttgtg
gccgctcagcagcagtgcaaccagcgctcattcacagacaggctcaaagtgacgccgtgg
ccccaagttcctgaccctaataaccgtgaagcaaggcagcagcgttttgctcactttaca
gaacttgcaattatctctgtgcaagagattgtggactttgccaagcaactacctggcttc
ctggagctcaccagggaagatcagattgctttattgaagacatctaccatagaggtgatg
ttgttggagacatctcggcgctacaatccagagattgagagcatcacctttcttaaggac
ctgagctataatcgggatgatttcgccaaagcaggtctgcagtttgagttcattaacccc
atctttgagttctcaaagggaatgaatgagctacagctgaacgatgctgaatatgcactt
ttaatcgccatcaacattttctctgcagaccgaccgaatgtgcaggaccagtccctggtg
gagaggctgcagcacacctatgtggaagcccttcattcttacatttgcatcaacagacca
aatgaccgcctgatgtttccacggatgttaatgaagctggtcagtcttcggacactaagt
agtgtccactccgaacaggtgtttgcccttcggctgcaggacaagaaactccctcccctg
ctttcagaaatctgggatgtgcatgagtga
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