Phalacrocorax aristotelis (European shag): 142066139
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Entry
142066139 CDS
T11493
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like isoform X1
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx00601
Glycosphingolipid biosynthesis - lacto and neolacto series
parx00603
Glycosphingolipid biosynthesis - globo and isoglobo series
parx01100
Metabolic pathways
Module
parx_M00068
Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
142066139
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
142066139
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
parx01003
]
142066139
Enzymes [BR:
parx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
142066139
Glycosyltransferases [BR:
parx01003
]
Glycan extension
P blood group
142066139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
142066139
NCBI-ProteinID:
XP_074969302
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Position
1:142919968..142928772
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AA seq
438 aa
AA seq
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MCSDSIFHLPFSQRGSAGLQSYRRSQRPLQNLVQLSSDFCGVLKSGKIMTVVLGEKALTG
ARMPRMSSCLSELTRLVLRQRFKALFTLTISFFVFFATVMYWRTGENAVGQLYRLPMLSR
DAQFLPCLLRPSTAEPHPSPGDVFFVETSEQTNPGYLFTCSVESAARAHPGTRVVVLMKG
LANGNGSLPNHWGFSLLGCFPNVEIRPLDLPELFSGTPLAKWYLQPDHQKEPYYLPVLSD
ACRIAIMWKFGGIYLDTDFIVLKNLKNLTNTLGLQAQGVLNGAFLSFTPKHEFMELCMQD
FVENYSGWIWGHVGPWLLTRVFKKWCSISNIQNNMSCKGVRALSPEGFYPIRWEDWKKLF
DTISSSELHRLLHNTYAVHVWNKLSHGTRLEITSQGLMAQLYSQFCPATSMKMKKDSEEQ
SWPLTLPVGPWLQGGSPA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcagactccatctttcaccttccgttttcacaaagaggaagtgccggactccag
agttacaggcgctctcagagacctcttcaaaatcttgtccagctgagcagtgacttctgt
ggtgtattgaagtcgggaaagatcatgacagttgtcttgggagagaaggctctgacggga
gcaagaatgcccaggatgtccagttgcctgtcagaactgaccaggttggtgctgcgccaa
aggttcaaggctctgtttaccctcaccatttcattttttgtattctttgccactgtcatg
tactggagaactggggagaatgctgtggggcagctctacaggttgcctatgctaagcagg
gatgctcagtttttgccttgccttctccgtcccagcaccgctgagccccatccttcccca
ggggatgtgttttttgtggagacttcagagcaaacaaacccaggttacctgtttacgtgc
tctgtggagtcagcggcccgggcgcaccctggaacaagggttgtggtgctcatgaaaggt
ttggcaaacggtaatggctcattacccaaccactggggcttctcgttgctgggctgcttc
cccaacgtggaaatccggccgctggacttgccggagcttttctcagggacgcctctggca
aagtggtacttgcagcctgaccatcagaaggaaccttattacttgcccgtcctgtctgat
gcctgcagaattgccatcatgtggaagtttggtggcatctacctggacacagacttcatt
gtgcttaagaacttaaagaacctcaccaatacccttggtttgcaggctcagggtgtcctg
aatggggcctttctgtcctttacgcccaaacacgagttcatggagctttgcatgcaggac
tttgtggagaactacagcggctggatctgggggcacgtgggcccgtggctgctgacacgt
gttttcaagaaatggtgctccatcagtaatatccagaacaacatgagctgcaaaggagtg
cgtgctctttccccagaaggcttttatcctattcggtgggaggactggaagaagttattt
gatacaatcagctcctcggagcttcacaggctccttcacaacacctacgcagtgcatgtg
tggaacaaactgagccatggtacaaggctagagatcacgtcccagggtctgatggctcag
ctgtattcccagttctgccctgctacaagcatgaagatgaagaaggactctgaagagcag
tcatggcctctaacgttacctgtgggcccttggctgcagggaggttccccagcctga
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