Parasaccharibacter sp. TMW 2.1888: DTQ13_06335
Help
Entry
DTQ13_06335 CDS
T08091
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DTQ13_06335 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parz03400
]
DTQ13_06335 (nth)
Enzymes [BR:
parz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DTQ13_06335 (nth)
DNA repair and recombination proteins [BR:
parz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DTQ13_06335 (nth)
Prokaryotic type
DTQ13_06335 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Msb1-Mug8_dom
Motif
Other DBs
NCBI-ProteinID:
UPO79952
LinkDB
All DBs
Position
complement(1380254..1380901)
Genome browser
AA seq
215 aa
AA seq
DB search
MSLKAVRAFLAALEKAHPDARSELIYHNTFELLVSVVLSAQATDVSVNKVTRALYEEAPD
PASMAALGEEGIARHIRTIGLWRSKAHNVALLCQQLLEKHDGQVPGSREELEALPGVGRK
TANVVLNIAFDQPTMAVDTHIFRLGNRTGLAPGKTVRAVEDELVRRIPKEMLRPAHHWLI
LHGRYVCKARTPECWRCPVTEWCLYREKNKIPPKR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaaggccgtccgtgcctttctggccgcgctggaaaaagcacacccggacgcc
cgcagcgagctgatctatcacaacacgttcgagctgctcgtcagtgtcgtgctttcagca
caggcgacggatgtttccgtcaacaaggtcacccgtgccctgtacgaagaagcccccgac
cctgccagcatggccgcactgggtgaggaaggcatcgccagacatatccgcaccataggc
ctctggcgctcaaaagcccataacgtggccctgctctgccagcagctgctggaaaaacat
gacgggcaggtccccggaagccgggaagagctggaagccctgcccggcgtgggtcggaaa
acagccaatgtcgtcctcaacatcgccttcgaccagccaaccatggctgtcgatacccat
attttccgcctcggcaaccgtactggcctcgcaccgggcaagaccgtccgtgccgtggag
gatgagctggtccgccgcatccccaaagagatgctccgccctgcccatcactggctcatc
ctgcatggccgctatgtctgcaaggcccgcacaccggaatgctggcgctgccccgtcact
gaatggtgtctctacagggaaaagaacaaaataccccccaagcgctga
DBGET
integrated database retrieval system
