Pseudomonas asiatica: LG197_17520
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Entry
LG197_17520 CDS
T08841
Symbol
ttgD
Name
(GenBank) toluene efflux RND transporter periplasmic adaptor subunit TtgD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pasi
Pseudomonas asiatica
Pathway
pasi01501
beta-Lactam resistance
pasi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LG197_17520 (ttgD)
01503 Cationic antimicrobial peptide (CAMP) resistance
LG197_17520 (ttgD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pasi03036
]
LG197_17520 (ttgD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasi02000
]
LG197_17520 (ttgD)
01504 Antimicrobial resistance genes [BR:
pasi01504
]
LG197_17520 (ttgD)
Chromosome and associated proteins [BR:
pasi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LG197_17520 (ttgD)
Transporters [BR:
pasi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LG197_17520 (ttgD)
Antimicrobial resistance genes [BR:
pasi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LG197_17520 (ttgD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
HH_EMRA
HH_YBHG
BSH_CusB
BSH_CzcB
YknX_C
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WDM86417
LinkDB
All DBs
Position
complement(3823947..3825095)
Genome browser
AA seq
382 aa
AA seq
DB search
MRLERALRARQLIPLAAIWLLVGCGKQETVESTAVPPEVGVYTVKAQALTLTTDLPGRTS
AYRVSEVRPQASGILQKRMFVEGAEVKQGEQLYQIDPRTYEALLARAEASLLTAQNLARR
YERLLDTNAISQQQYDDAMATWKQAQAEAQMARINMQYTKVLAPITGRIGRSAVTEGALV
TNGQAQELATVTQLDPIYVDVNQPITRLLGLKRALESGRLQRVGDNQAQVSLTLDDGTPY
PLKGVLKFSEVSVAPSTGSVTLRAEFPNPDHKLLPGMFVHALLNEGEQQAAILVPHQAVG
RDARGVPTVWVVKPDNTVESREVQTLQTVGNAWLLGAGINDGERVITEGVQLARSGITVK
PVAAKNVKLMSEFGSQVQAQAH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgagactcgagcgagctttgcgtgcgagacagttaattccgctagcagccatctggctg
ctggtgggttgcggtaagcaggaaacggtggaaagcactgcggtgcctcccgaagttggg
gtctataccgtgaaggcccaagcactgaccctgaccacggacctgcccggacgcacctcg
gcctaccgagtctccgaagtgcgtcctcaggcctccggcattctgcagaaacgcatgttc
gtagagggcgcagaggtgaagcagggtgagcagttgtaccagatcgacccgcgcacctac
gaggcgctgttggcccgtgccgaggcgagcctgttgaccgcgcagaatctcgcccgccgt
tatgagcgcctgctcgacaccaacgcgatcagccagcagcagtacgacgacgcaatggcc
acctggaagcaggcgcaggccgaggcccagatggcgcgtatcaacatgcagtacaccaag
gtgctggcaccgattaccggccgcatcgggcgttcggccgtcactgaaggcgcactggtg
accaatgggcaagcgcaggagttggccaccgttacccaactcgatccgatctatgttgac
gtcaatcagcctatcaccaggctgctgggcctcaaacgtgccttggagtcaggacgcctg
cagcgcgttggggataatcaggctcaagtcagccttaccctcgatgacggcacaccctac
ccgctcaaaggagtactcaagttctccgaggttagcgtcgccccctccaccggctcggtc
accctgcgtgccgagttccccaatcctgatcacaaactgctaccgggcatgttcgtccat
gcactgctcaatgagggcgagcaacaggcagccattctggttccccatcaggccgtgggc
cgtgatgcgcggggagtgcctaccgtatgggtggttaagccagataacaccgtggaatcg
cgtgaagtgcaaaccttgcagaccgtaggcaacgcctggttactaggtgcgggtatcaat
gatggcgagcgggtgattaccgagggcgtccagctggcccgctcaggtatcacggttaag
cctgttgccgccaagaacgtcaagctgatgagcgaattcggctcacaggtgcaagcccag
gcccattga
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