Pseudomonas asiatica: LG197_20100
Help
Entry
LG197_20100 CDS
T08841
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
pasi
Pseudomonas asiatica
Module
pasi_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasi02000
]
LG197_20100
01504 Antimicrobial resistance genes [BR:
pasi01504
]
LG197_20100
Transporters [BR:
pasi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LG197_20100
Antimicrobial resistance genes [BR:
pasi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
LG197_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WDM86904
LinkDB
All DBs
Position
4325775..4328954
Genome browser
AA seq
1059 aa
AA seq
DB search
MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQ
GRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIEISDEVRAKMAELKKDFPEGMDYSIVYDPTVFVRGSIEAVVHTLFEALVLVVLVVIL
FLQTWRASIIPLMAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIGLGLKPLEATQKAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKDHHAPKDRFSRFLEKLLGSWLFAPFNRFFDRASNRYVGGV
RRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI
KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAAL
NAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLGYEALYKETQNIIAKSHNVPE
LAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVN
VQAEQQFRLDAEQIGQLKVRNNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAA
PGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
EQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFSSGAGSEMRHAMGVAVFSGMI
GVTVFGLFLTPVFFFLIRRFVERRQARKAERAQSLESHA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctcgaaattcttcattacccggccaattttcgccgcggtgctgtcgctggtg
ctgctgatcgcgggttcgatctcgctgttccagctgccgatcagcgaataccccgaagtg
gtgccgcccaccgtggtggtgcgcgccaacttccccggcgccaaccccaaggtcatcggc
gaaaccgtcgccgcgccactggagcaggcgattaccggcgtggagaacatgctgtacatg
tcctcccagtccaccgctgacggcaagctgacgctgaccatcaccttcgccctgggcacc
gacctggacaacgcccaggtgcaggtgcagaaccgcgtcacccgtacccagcccaagctg
ccagaggaagtgacccgcatcggtatcacggtcgacaaggcctcgcccgacctgaccatg
gtcgtgcacctgacctcgccggataaccgctacgacatgctctacctgtccaactacgcc
atcctcaacatcaaggatgagctggcgcgcctgggcggcgtgggcgatgtgcagctgttc
ggcatgggcgactactcgctgcgcgtgtggctggacccgaacaagaccgcttcgcgcaac
ctcaccgccagtgatgtggtggctgcgatccgcgagcagaaccgccaggtggccgccggc
cagctgggcgccccacccgccccgggttcgaccagcttccagctgtcgatcaacacccag
ggtcgcctggtgaatgaggaagagttcgagaacatcatcatccgcgccggtgccgatggc
gaaatcacccgcctgaaggacatcgcccgggtcgaactcggttccagccagtacgccctg
cgttcgctgctgaacaaccagccggcggtggccattccgatcttccagcgcccaggctcc
aacgccatcgagatctccgacgaagtgcgggcgaaaatggccgagctgaagaaggacttc
cccgagggcatggactacagcatcgtctatgacccgaccgtgttcgtccgtggttccatc
gaagccgtggtacacaccctgttcgaagcgctggtgctggtggtgctggtcgtcatcctg
ttcctgcagacctggcgtgcctcgatcatcccgctgatggccgtgccggtatcgctgatc
ggtacctttgccgtgatgcacctgttcggcttctcgctcaacgcgctgtcattgttcggc
ctggtcctggccatcggtatcgtggtggacgatgccatcgtcgtggtggagaacgtcgag
cgcaacatcggcctgggcctgaaaccgctggaagccacgcaaaaggccatgggcgaagtg
accgggccgatcatcgccaccgccctggtgctgtgcgcggtgttcgtacctgctgcgttc
atttccggcctgaccgggcagttctacaagcagttcgctctgaccatcgccatttccacg
gtcatctcggcattcaactcgctgaccctgtcgccggccctggcagccgtgctgctgaag
gaccaccatgcgcccaaggaccgtttctcgcggttcctggaaaaactgctgggcagctgg
ctgttcgccccgttcaaccgcttcttcgaccgcgcttccaaccgctacgtcggcggcgtg
cgtcgggtcatccgctccagcggcatcgccctgttcgtgtatgccggcctgatgggcctg
acctacctcggcttctcgtccaccccgaccggtttcgtgccggcccaggacaagcagtac
ctggtggcgttcgcccagctgcctgacgcggccagcctcgaccgcaccgaagcggtgatc
aagcgcatgagcgaaatcgccctgaagcagcctggcgtggccgactcggtagccttccct
ggcctgtcgatcaacggtttcaccaacagcccgaacagcggcatcgtgttcaccccgctc
aagccgttcgacgagcgcaaggacccgagccagtcggcggcggccatcgctgctgcgctg
aatgcccagttcgccgacatccaggacgcctacatcgcgatcttcccgccaccgccggta
caaggcctgggcaccatcggcggcttccgtctgcagatcgaagaccgtggcaacctgggc
tacgaggcgctgtacaaggaaacccagaacatcatcgccaagagccacaacgtgccggaa
ctggcgggccttttcaccagctaccaggtcaacgtgccccaggtcgatgccgccatcgac
cgggaaaaggccaagacccacggcgtggcgatcaccgacatcttcgacaccctgcaggtc
tacctgggctcgctgtacaccaacgacttcaaccgctttggccgtacctatcaggtcaac
gtccaggccgagcagcagttccgcctcgatgccgagcagatcggccagctgaaggtgcgc
aacaacctcggcgagatgatccccctggcgaccttcctcaaggtcagcgacacctccggg
cctgaccgggtgatgcactacaacggtttcatcaccgccgagatcaacggcgccgcggca
ccgggctacagctccggccaggccgaagctgccatcgagaagctgctgaaggaggaactg
cccaacggcatgaccttcgagtggaccgacctgacctaccagcagatcctttcgggcaat
accgcgctgttcgtgttcccgctgtgcgtgctgctggccttcctggtgcttgccgcccag
tacgaaagctggagcctgccgctggcagtgatcctgatcgtgccgatgaccctgttgtcg
gccatcaccggggtgatcgtgtcggggggtgacaacaacatcttcacccagatcggtctg
atcgtactggtgggcctggcgtgcaagaacgcgatcctgatcgtcgagttcgccaaggac
gaacaggccaaggggctcgacccgctggctgcggtactggaagcctgccgcctgcgcctg
cggccgatcctgatgacctcgatcgctttcatcatgggtgtggttccactggtgttcagc
tccggtgccggttctgaaatgcgccatgccatgggcgtggcggtgttctcgggaatgatc
ggggttaccgtgttcggcctgttcctgaccccggtgttcttcttcctgattcgccgtttc
gtcgagcgtcgccaggcccgcaaggccgaacgcgcccaatcgctggagagccatgcatga
DBGET
integrated database retrieval system
