Pseudomonas asiatica: LG197_24635
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Entry
LG197_24635 CDS
T08841
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi00020
Citrate cycle (TCA cycle)
pasi00785
Lipoic acid metabolism
pasi01100
Metabolic pathways
pasi01110
Biosynthesis of secondary metabolites
pasi01120
Microbial metabolism in diverse environments
pasi01200
Carbon metabolism
pasi01210
2-Oxocarboxylic acid metabolism
Module
pasi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pasi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LG197_24635
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LG197_24635
Enzymes [BR:
pasi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LG197_24635
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
DUF7284
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
WDM87751
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Position
complement(5291497..5294328)
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AA seq
943 aa
AA seq
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MQESVMQRMWESAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSTATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAKLDPLGLWQ
RPAPVDLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIFEALQKTYCRTIGAEFTHIV
DSEQRSWFQQRLESVRGRPEFSADVQAHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEMIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKMNELGSGD
VKYHQGFSSNVMTPGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDTVGDKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDARSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPNGTQPLMY
QQISKQRTTRELYAEALIQAGRIDAERAQAKIDEYRNALDNGLHVVKSLVKEPNRELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLQFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYVPLKNLFPGQPQF
ELYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDSLDPAKVERLVLCGGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLVEILAPYTNLKHAVWCQEEPMNQGAWYSSQHHMRRI
LGRHNKALVLEYAGRDASAAPACGYASKHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtgggaaagcgcccacctttcaggtggtaacgct
gcatatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctacttccagaagttgcccgccgacggcagcaccgctaccgatgtatcgcac
tcgacaatccgcgaccatttcgtactgctggcaaagaaccagcgccgcgcccaaccggta
tccgccgggagcgtgagcagtgaacacgagaagaagcaggttgaagttctgcgactgatc
caggcctatcgtatgcgcggccatcaggctgccaagctcgacccgttggggttgtggcag
cgtcctgcgcccgtagacctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaggcgagcctacgcgagatc
ttcgaggcgctccagaagacatattgtcgcaccattggcgccgagttcacccatatcgtc
gattccgagcagcgcagctggttccagcagcgtctggaaagcgtgcgcggccgtccggag
ttttccgctgacgtgcaggcccacctgctcgagcgcgtgaccgccggtgaaggccttgag
aaatatctgggcaccaagtacccgggcaccaagcgtttcggcctcgagggcggcgaaagc
ctgatcccgatgctggacgagatgatccagcgctccggttcctacggcaccaaggaagtc
gtgatcggcatggcccaccgtggccgcctgaacgttctggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagatgaacgagctgggctccggtgac
gtcaagtaccaccagggcttctcctcgaacgtgatgaccccgggcggcgaagtgcacctg
gccatggcgttcaacccgtcccacctggaaatcgtctcgccagtggtcgagggttcggtg
cgcgcccgtcaggaccgccgcaacgacaccgttggcgacaaggtactgccgatctcgatc
cacggcgacgcagcattcgccggccagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggttggtttc
accatcagcaacccgctggacgcgcgctccaccgagtacgccaccgacgttgccaagatg
atccaggcgccgatcctgcacgtgaacggcgacgacccggaagccgtgctgttcgtgacc
cagctggccatcgactaccgcatgcagttcaagcgtgacgtggtcatcgacctggtctgc
taccgccgccgcggccacaacgaggccgacgagccgaacggcacccagcctttgatgtac
cagcagatcagcaagcagcgcaccacgcgtgaactgtacgctgaggcactgatccaggcc
ggccgcatcgatgccgaacgcgcccaggccaagatcgacgagtaccgcaacgcgctggac
aacggcctgcacgtggtgaagagcctggtcaaggagccgaaccgcgagctgttcgtcgac
tggcgtccgtatctgggccatgcctggaccgcgcgtcacgatacccgcttcgacctcaag
actctgcaggaactgtcggccaagctgctggagatcccggaaggtttcgtcgtccagcgc
caggtcgccaagatctacgaagaccgccagaagatgcaggccggtggcttgccgatcaac
tggggttatgcagagaccatggcctacgccaccctgcagttcgaaggtcacccgatccgc
atgaccggccaggacatcggccgtggcaccttctcgcaccgtcacgcggtgctgcacaac
cagaaggacgccagcacctacgtaccgctgaagaacctgttcccgggccagcctcagttc
gaactgtacgactccttcctgtcggaagaagcggtactggccttcgaatacggctactcg
accaccacgccgaacgcgctggtgatctgggaagcccagttcggtgacttcgccaacggt
gcgcaagtggtgatcgaccagttcatcaccagcggcgagcacaagtggggccgtctgtgc
ggtctgaccatgctgctgccacacggttatgaagggcagggcccggagcactcctccgcg
cgcctggagcgttacctgcagctgtgcgccgagcacaacatccaggtctgcgtaccgacc
accccggcccagatctaccacctgctgcgtcgccaggtcatccgtccgctgcgcaagccg
ctgatcgtgctgacgccgaagtctctgctgcgccacaagctggccatctcgaccctggaa
gacctggcagaaggctcgttccagaccgtgatcccggaaatcgacagcctcgatccggcc
aaggtcgaacgcctggtcctgtgcggcggcaaggtttactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagacatcgccatcgtgcgtatcgagcagctgtatccgttccct
gaggacgacctggtcgaaatcctggcgccttacaccaacctcaagcatgcggtctggtgt
caggaagagccgatgaaccagggcgcctggtacagcagccagcaccacatgcgccgtatc
ctgggccgccacaacaaggcactggtcctggaatacgccggccgcgacgcttccgccgcg
ccagcctgtggttacgcatcgaagcacgccgaacagcaggaaaaactgctgcaagacgcc
ttcactgtttaa
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