Pseudomonas asiatica: LG197_28625
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Entry
LG197_28625 CDS
T08841
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pasi
Pseudomonas asiatica
Pathway
pasi01501
beta-Lactam resistance
pasi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LG197_28625
01503 Cationic antimicrobial peptide (CAMP) resistance
LG197_28625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pasi03036
]
LG197_28625
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasi02000
]
LG197_28625
01504 Antimicrobial resistance genes [BR:
pasi01504
]
LG197_28625
Chromosome and associated proteins [BR:
pasi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LG197_28625
Transporters [BR:
pasi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LG197_28625
Antimicrobial resistance genes [BR:
pasi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LG197_28625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
BSH_CzcB
HH_MFP_RND
RND-MFP_C
Biotin_lipoyl
YknX_C
BSH_LcnD
CzcB_C
BSH_CusB
BSH_YhbJ
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
WDM88490
LinkDB
All DBs
Position
6153474..6154622
Genome browser
AA seq
382 aa
AA seq
DB search
MLRRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITVAAALAEQRPWQERLPA
VGSLKALQGVELSLEVEGIVKALHFDSGQQVKAGQLLLQLNDDQETALLGTAQADLGLAK
VDFGRGSQLVGDSAISRGEFDRLTAQYRRNQAVVDQLKASKTKKSISAPFSGTIGIRQVD
VGDYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQTFPASLSAIN
PKVEETTRNLLVRATMANPDSKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVYV
ATPKKDKDGKPLNDDKGQPQLTAEQRTVQTGERRDGVVVVSKGLQAGEQVVTAGQLKLTP
GAAIRIGQDKALKPAPGTPGKD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccgcatgctcatcatgttggccgtggttctgctgatcgtgctggccctg
gggggctacaaagccttttcgatctaccagcagatccagatgttcactgcccccaagccg
cccatcaccgtggcggccgccttggccgaacagcgcccgtggcaagagcgcctgcccgct
gtcggcagcctcaaggcgctacagggcgttgagctgagcctggaagtggaaggcatcgtc
aaggccctgcatttcgactcaggccagcaggtcaaggccgggcaactgttgctgcaactc
aacgacgaccaggaaaccgccctgctcggcaccgcccaggccgacctgggcctggccaag
gtagatttcggccgtggcagccagctggtcggcgactcagccatctcccgcggcgaattc
gaccgcctcaccgcccagtaccggcgcaatcaggcggtggtcgaccagctcaaggcatcg
aagaccaagaagagcatcagcgctccgttcagtggcaccatcggcattcgccaagtggac
gtcggcgactatctggccgccggcacggtgatcgccaccctgcaggacacatccagcctc
tacgtcgacttcaacgtaccggaacaggccctgccgcacctcagcctgggccagcaggtg
ctggtgcaggtggccgcctacccgggccagaccttccccgccagcctcagcgccatcaac
cccaaggtcgaggaaaccacgcgcaacctgctggtgcgcgcaaccatggccaacccggac
agcaagctgctgccgggcatgttcgccagcctgctgatcctgctacccaacccgcagcca
caagtggtggtgccggaaagcgccatcacctacaccctgtatggcaactcggtgtatgtc
gcaacgccgaaaaaggacaaggacggcaagccactaaacgacgacaagggccagccgcag
ctcaccgccgagcagcgcacggtgcaaaccggcgagcgccgtgacggcgtggtggtggtc
agcaagggcctgcaggccggggaacaggtggtcactgccggccaactgaagctcaccccc
ggtgccgcgatccgcatcggccaggacaaagccctgaagcccgcaccgggcacgccgggc
aaggactga
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