Paraglaciecola sp. T6c: Patl_1776 Help Entry Patl_1776         CDS       T00372                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pat  Paraglaciecola sp. T6c Pathway pat03030   DNA replication pat03410   Base excision repair pat03420   Nucleotide excision repair pat03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pat00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Patl_1776    03410 Base excision repair     Patl_1776    03420 Nucleotide excision repair     Patl_1776    03430 Mismatch repair     Patl_1776  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pat03032]     Patl_1776    03400 DNA repair and recombination proteins [BR:pat03400]     Patl_1776 Enzymes [BR:pat01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Patl_1776 DNA replication proteins [BR:pat03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Patl_1776 DNA repair and recombination proteins [BR:pat03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Patl_1776    NER (nucleotide excision repair)     GGR (global genome repair) factors      Patl_1776    MMR (mismatch excision repair)     DNA ligase      Patl_1776   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Patl_1776 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH DZR_2 MazE_antitoxin Motif Other DBs NCBI-ProteinID:  ABG40297 UniProt:  Q15UZ1 LinkDB All DBs Position 2133682..2135715 Genome browser AA seq 677 aa AA seqDB search MSNALSPAQRLTQIINTINEYNYQYYVQDNPSVPDAEYDRLMRELLDIENNHPDLRSPDS PSQKVGGAALSAFEQVEHEVPMLSLDNAFDEDDMQAFEKRIKDRLKISSEISFSCEPKLD GLAVSILYENGQLVRAATRGDGRVGENITTNVRTIANVPLRLRGENFPSRLEVRGEVIMT RAGFVTLNEAQIKKGKKPFVNPRNAAAGSLRQLDPKITAARPLLFYSYSLGLVENEQQPL GETHSSRLAQLSEWGLPLSKELEVTQGATQCLTYFHKIGELRSQLSYDIDGVVFKVDNIA MQQELGFVARAPRWAIAHKFPAQEEMSTLLDVEFQVGRTGAITPVARLEPTFVGGVTVSN ATLHNQDEINRLGIKIGDSVIIRRAGDVIPQIVAIVADKRPDDAKDIVFPESCPVCDSAI EKLEGEAVARCTGGLYCKAQRKEAMKHFASRKALDVDGLGDKLIEQLVDAEMVKSPADFF ALDIAPLSSMERMGEKSAVNLVNALEKSKKTTLAKFLYSLGIREVGEATAQNLAQHFLTL EAIEQADLDALQAVSDVGVIVAQHVFNFFKEEHNLEVISALLEAGVHWPKIEKLALDELP LAGQVYVLTGTLNVMDRNSAKAKLQSLGAKVSGSVSAKTDCLVAGEKAGSKLTKAQDLGV KVMNEDDMLAMFADLEG NT seq 2034 nt NT seq  +upstreamnt  +downstreamnt atgtctaatgctctgtcgcctgctcaaaggctgacgcaaattattaacaccatcaacgag tacaattaccaatactacgtacaggacaacccatccgtgcctgatgccgaatatgatcgc ttaatgcgtgaattgctggacattgaaaataaccaccctgatctacgcagcccggattct ccctcgcaaaaagtgggcggagcagctcttagcgcgttcgaacaggttgagcacgaagta cccatgttgtctcttgataatgcgttcgatgaagatgacatgcaggcatttgaaaagcgc atcaaagaccgtttaaagataagcagtgaaattagttttagctgcgagcctaaacttgat ggcctagcggtgagtattttgtacgaaaacgggcagttagttcgcgctgccacacggggc gatggtcgagtaggtgaaaacatcacgactaacgtacgtaccattgctaacgtgcctttg cgcttgcgaggagagaactttccgagccgattagaagtgcgcggtgaagtcatcatgacc cgagcaggcttcgttactttaaatgaagcacagattaaaaagggtaaaaaaccgtttgtt aacccgagaaatgccgctgccgggagtttgcgtcagcttgacccgaagatcaccgcagca cgacctttgctcttttacagttactcgctgggcttggtcgaaaacgaacaacaacctctg ggcgaaacgcattcatcgcgcttagctcagttaagcgaatggggcctacctttgagcaaa gagcttgaggtgacgcagggcgcaacacagtgcttaacctattttcataagattggagag ctgcgaagccagctaagctatgacatagacggcgtagtattcaaagttgataatattgcc atgcagcaagagctgggttttgtagctcgtgcgccgcgctgggcgatagcccataagttt cctgcgcaagaagagatgagcaccttgctcgacgttgagtttcaagtcggcagaaccggt gcaattacgccagtagcaaggctcgaaccgacgtttgttggaggcgtgacggtttctaac gctacgctgcataatcaagatgaaatcaatcgtttaggtatcaagattggtgacagcgtc attattcgccgagcaggagatgttatcccgcagatagtggcgatagtggcagataagcgc ccagatgacgctaaagacattgtattccctgaaagttgcccggtctgtgattcagcgatt gaaaaactagaaggcgaagccgtggctcgctgcacgggaggcttgtactgcaaggctcag cgtaaagaagccatgaagcattttgcatcacgcaaagcgcttgacgtggatggcctcggg gataaattaattgagcaattagtcgacgctgaaatggttaaaagcccggctgattttttt gctctggatatcgctcctttatcaagtatggagcgaatgggcgaaaaatcggcggtaaat ttagttaacgccttagaaaaaagcaaaaaaaccacattagctaaattcttatattcttta ggcatccgtgaagtgggcgaggcgacagcgcagaatttagcacaacactttttaacgtta gaggctattgagcaagcagatctggacgcgctacaagcagtatcggatgtcggtgttatt gtggctcagcacgtgtttaactttttcaaggaagagcacaacctcgaagtgattagtgca ctgttagaggccggtgtacattggccaaaaatcgaaaagctagcattagatgagttgccg cttgcagggcaggtatacgtgctcaccgggacgttaaatgtgatggaccgaaactcggct aaagcgaagttgcaaagcttgggagcaaaagtatcgggcagtgtatcggctaaaaccgat tgcttagtggccggtgaaaaggccggctctaagttaactaaagctcaggatttgggggta aaagtcatgaacgaagatgacatgttagccatgttcgccgaccttgaaggttaa

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