KEGG   Paraglaciecola sp. T6c: Patl_2971
Entry
Patl_2971         CDS       T00372                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pat  Paraglaciecola sp. T6c
Pathway
pat03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Patl_2971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pat03400]
    Patl_2971
Enzymes [BR:pat01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Patl_2971
DNA repair and recombination proteins [BR:pat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Patl_2971
 Prokaryotic type
     Patl_2971
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH DUF7024 HHH_5
Other DBs
NCBI-ProteinID: ABG41479
UniProt: A0A9J9BB75
LinkDB
Position
3597932..3598564
AA seq 210 aa
MNQQKRVEMLTRWRDANPHPTTELNFTSPFELLIAVLLSAQATDVSVNKAMAKMFPVANT
PEAVYALGVDGVKEFIKTIGLFNTKAVNVIKTCKMLIEQHNSVVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKLAMGKTVDDVEQKLLKVVPTEFKVDVHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKDKVD
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaaccaacagaaacgtgtagagatgttaacgaggtggcgtgatgctaacccgcaccct
acaactgaattgaacttcacaagtcccttcgagctactgattgccgttttgctctcagct
caggcgaccgacgtgagcgttaataaagccatggccaagatgttccctgtagccaataca
cctgaagctgtttacgccctgggcgtggatggcgtaaaagagttcattaaaaccattggg
ctgtttaataccaaagccgtgaatgtgatcaaaacctgcaagatgcttatcgagcaacat
aacagcgtggttccagaggatcgcgcagccctagaggcattacctggcgttggtcgcaaa
acagcaaatgtggtgcttaatacggcctttggctggccgacaatcgcagtagatacgcat
atatatcgtgtttctaaccgcactaagttagcaatgggtaaaactgttgatgacgttgaa
cagaaactgcttaaggttgttcctacagaatttaaagtcgacgtgcaccactggctaata
ctccacggacgttacacctgcatcgctcgtaaaccacgttgcggttcttgcattatcgaa
gatttgtgtgaatttaaagataaagtagattag

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