Paraglaciecola sp. T6c: Patl_3800
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Entry
Patl_3800 CDS
T00372
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat01501
beta-Lactam resistance
pat01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Patl_3800
01503 Cationic antimicrobial peptide (CAMP) resistance
Patl_3800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pat03036
]
Patl_3800
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_3800
01504 Antimicrobial resistance genes [BR:
pat01504
]
Patl_3800
Chromosome and associated proteins [BR:
pat03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Patl_3800
Transporters [BR:
pat02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Patl_3800
Antimicrobial resistance genes [BR:
pat01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Patl_3800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CzcB
YknX_C
HH_AAEA_pHBA
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
ABG42300
LinkDB
All DBs
Position
complement(4582417..4583631)
Genome browser
AA seq
404 aa
AA seq
DB search
MKYLTCIGGLLLASVLLSGCQQETTQPQAGRVTEVAYLTVTPTEYKIDTQMQGRVVASLT
AEVRPQVGGIMQERLFTEGEFVEEGDVLYQIEPATFQAAVNEAKANLNSAKATVATAKLK
DQRFADLLKFEGVSQQDADDAHATYLEAKADIERFEAALETARINLEFSKVKAPISGRIG
ISNVTPGSLVTASQTTALSTIRTLDPIYVDMIKSSTEILKLRQLLAKADIKKGSTDVSLL
LEDGSEYELKGQLKMQEVAVDASTGAVTLRAEFPNPDGVLLPGMFVRTRVNEAVDDNAIL
VPQQGVYHNPAGEAYAYVIDEDNKVQSRVVETISAVGNKWFISSGLKAGDKLLVEGSSKV
GPGSEVKTVEVQMQSNGKMVAVAAQSGNSSAAPSSAPSAIKGGV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacttaacgtgtattgggggactgttattagcctctgtcttgctaagtggatgc
cagcaagaaacaactcagcctcaggctgggcgtgtcactgaagttgcttatctcaccgtg
acccctaccgagtataaaattgacacccaaatgcaaggtagagtggtagcctcgttgacg
gctgaagtgcgtccccaggttggtggtattatgcaagagcgcctatttactgaaggcgag
ttcgtagaagaaggtgacgttctataccaaatcgagcctgcgacctttcaagctgccgtc
aatgaagctaaggcaaatttaaacagtgctaaagcaaccgttgcaaccgccaagctcaaa
gatcagcgtttcgctgaccttttgaaatttgaaggtgtgtcgcaacaagatgcagacgat
gctcatgcaacgtatttagaagcaaaagcagatattgaacgtttcgaagctgctttagaa
acagcgcgcatcaaccttgagtttagcaaagtaaaagcacccatctcaggacggattggt
atttcaaatgttacccctggatcattggtcacggcatcacaaacgacggccctgtcgaca
attcgtacattagaccccatttatgtggacatgatcaaaagcagcacagaaattttgaaa
ttacgtcaattgttagccaaagcagatattaaaaaaggctctacggatgtttctctgctt
cttgaagatggcagtgagtacgagctaaaaggccagctgaaaatgcaagaagtagcggtt
gacgcttcaacaggtgccgtgacgctaagagctgaattccctaaccctgacggtgtgtta
ttgccaggtatgtttgtgcgtactcgcgttaatgaagcggttgacgacaacgctattctc
gtgccccagcaaggtgtttaccataaccctgcaggtgaagcttatgcttacgtcattgac
gaggacaacaaggtacagtcgcgcgtggtggaaaccatcagtgcagtgggtaacaaatgg
tttatcagctcaggtttgaaggcgggcgacaaactattggtagaaggctcaagcaaggtt
ggccccggcagtgaagtgaaaacggtagaagtgcaaatgcaaagtaacggtaagatggtt
gctgttgcagctcaatcaggaaattcgtccgctgcgccgtcttctgcaccttctgctata
aaagggggcgtgtaa
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