Paraglaciecola sp. T6c: Patl_4125
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Entry
Patl_4125 CDS
T00372
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18299
multidrug efflux pump
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_4125
01504 Antimicrobial resistance genes [BR:
pat01504
]
Patl_4125
Transporters [BR:
pat02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Patl_4125
Antimicrobial resistance genes [BR:
pat01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
Patl_4125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABG42624
UniProt:
A0A9J9BDL0
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All DBs
Position
4960184..4963360
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AA seq
1058 aa
AA seq
DB search
MFSQFFIRRPIFAAVISLIFFIVGAISVWQLPITEYPEVVPPTVVVTANYPGANPKVIAE
TVASPLEQEINGVENMLYMSSQATSDGTMTLTITFAIGSDVDLAQTQVQSRVERAKPRLP
EEVQRLGVVTEKSSPDLTMVVHLTSPDERYDMLYLSNYAVLNVKDELARINGVGQVRVFG
AGDYSMRVWLDPNKVAALGLSPANIVAAIREQNQQAAAGSLGAQPSGDSDFQLLINVKGR
LTDVEEFEDIIVKVGEQGQISRLKDVARVELGASTYALRSMLDNKDAAAMPVFQASGSNA
IQISDDVRSKMAELSKSFPEGLSYDIVYDPTVFVRGSIEAVVKTLFEALLLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMHLLGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
IADGLSPIAATQKAMKEVTGPIVATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKSHDSKKDALTRGMDKLLGGWLFNPFNRLFTRLSDGYGWVVKK
VLRFGVLVGVIYIGLVSLTGLQFATTPTGYVPGQDKQYLVAFAQLPDAASLDRTEEVIKE
MSRIALEQPGVANSVAFPGLSINGFTNSTNSGIVFTPLDDFADRTDPSLSAGAIAAALNQ
KFAAIEDAYIAIFPPPPVQGLGTIGGFRLQIQDRANYGYDELYKVTMQVMQKAWATPELA
GVFSSYQINVPQLDVDIDRTKAKQQSVSLDELFTTLQGYMGSVYANDFNQFGRTYQVNVQ
ADEQFRQTPEQIAQLKVRNNKGDMVPIGSFINVNNTAGPDRVMHYNGFTTAEINGGAAPG
FSSGEAQAAIEKILAQTLPNGMTYEWTELTYQQILAGNAGMYIFPLIILLVFMVLAAQYE
SLSLPLAIILIIPMTLLSALSGVLIAGGDNNIFTQIGFIVLVGLATKNAILIVEFAKELQ
DEGSTAYEAILESGRLRLRPILMTSIAFIMGVVPMVFSSGAGSEMRQAMGVAVFSGMIGV
TVFGLLLTPLFYYVLARRGERQSSNALVNTAKQEADHG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgcagttttttatacgccgtcccatatttgcggccgttatctcgctgattttc
tttatcgtaggggccatttctgtttggcaactgccgataacagaatatccggaagtggtt
cccccgactgtggtcgtgaccgcaaactacccaggtgcaaatccaaaagtgattgccgaa
acagtggcatcacctcttgagcaggagattaacggtgtggagaacatgttgtacatgtct
tctcaggccacctctgatggcactatgacactcaccattacatttgccattggtagcgat
gtagacttggcgcaaactcaagtgcaaagccgtgttgaacgtgccaagccgcgtcttcct
gaggaggtacaacgccttggtgttgtgaccgaaaaatcatcaccagatttaaccatggtg
gtgcatttaacctctcctgatgaacgctacgacatgttgtatttgtctaactacgcggtg
ctaaacgtcaaagacgagctcgctcgcattaacggggttggccaagtgcgcgtattcggt
gccggcgattacagcatgcgtgtatggctagacccaaataaagtggctgcattgggcttg
tctccagcaaatattgtggcggctattcgtgagcaaaaccaacaagctgctgctgggagc
ctaggtgctcagcctagtggcgacagcgactttcagctgttaattaatgttaaaggtcgc
ttgacggatgtagaagaatttgaggacatcattgttaaagtgggcgaacaaggccaaatt
agccgcttaaaggatgttgcacgcgttgaacttggcgcatcaacttatgcccttcgttct
atgctcgataataaagacgctgccgccatgcctgtatttcaagcatcgggctctaacgcg
atccaaatttctgatgatgtacgcagcaagatggctgagctatctaagagcttccctgaa
ggtttgagttacgacatcgtttacgacccaaccgtatttgtgcgaggctcaattgaagcc
gtggttaaaaccttgttcgaagccctactattagtggtattggttgtggtgctgttctta
caaacgtggcgcgcctcgatcattcctttggtcgcagttcctgtatctctggttggcacc
tttgccttcatgcatctgttaggcttttcacttaatgccttatcgctatttggcttggta
ctcgccatcggtattgtagtagatgacgccatcgtggtggttgaaaacgttgagcgcaac
atcgcagatggcttatcccctatcgctgcaacccaaaaagccatgaaagaagtcactggc
cctatcgtagcgaccaccttggttctagcggcagtatttattccaacggcatttatgtca
ggcctaacggggcagttttacaagcagttcgccctgaccattactatttcaacctttatc
tcggcgattaactcgctaacgctaagccctgcattatcagccttattgcttaaaagtcat
gacagcaagaaagatgccctgacccgaggcatggacaaactgctcggcggctggttattt
aacccatttaaccgcttattcactcgtttatcagacggctacggctgggtcgttaaaaaa
gttctgcgctttggtgttctggttggtgtgatttatatcggcttggttagcttgaccggt
ttgcaattcgccaccacgcctacgggctatgtacccggccaagacaaacaatatctagtg
gcatttgcccagttacctgatgcagcctcgcttgatcgcacagaagaagtcattaaagaa
atgtctcgcattgcgcttgagcaacccggagtggccaactcagttgccttccctggtttg
agcattaacggcttcaccaacagcaccaacagcggtatcgtttttactcctcttgatgac
tttgcggatcgcacagacccgtcattgtcagcaggtgccattgcagcagcgctcaatcag
aaatttgccgccattgaagatgcatacattgctattttcccgccgccgccggtacagggc
ttaggcaccatcggtggctttaggctgcaaattcaagatcgcgccaattatggttatgac
gagctgtacaaagtcaccatgcaagtaatgcaaaaagcgtgggcgacgcctgaactagcc
ggagtgttctctagctatcaaatcaacgtgcctcagctagatgtagacattgatcgcacc
aaggctaagcagcagtctgtttcgcttgatgagctattcactactttgcaaggttatatg
ggctcggtatacgccaatgacttcaaccagtttgggcgtacttaccaagtcaatgtgcaa
gcggatgagcaattcagacaaacgcctgagcaaattgcccagctcaaggtacgtaacaat
aagggtgacatggtacccatcggctcgtttattaacgtgaacaataccgcaggccctgac
cgcgtgatgcactacaacggctttaccaccgctgagattaatggcggcgcagcgccaggc
tttagctcaggtgaagcacaagctgcgattgaaaaaatattagcacaaaccttgcccaac
ggcatgacctacgagtggacagaattaacctatcaacaaatattggcgggcaatgcaggc
atgtatatcttcccgttgatcatcctgttggtattcatggtgttagccgctcagtacgag
agcttaagcttacctttggcgattattttgatcatcccgatgacgttactatcagcgtta
agcggcgtacttatcgccggaggcgacaacaatatattcacccaaattggctttattgtg
ctggtaggactggcaaccaaaaacgccattttaattgttgagttcgccaaagaattgcaa
gacgaagggagtaccgcttatgaggcaatccttgaatctggccgcttacggttgcgccca
atattgatgacctctatcgcattcattatgggggtagtgccaatggtgttctcaagtggc
gcaggctctgagatgcgccaagccatgggcgttgctgtgttctcaggcatgatcggggtc
accgtgtttggtctacttcttacgccattattttactacgtgctcgctagaagaggcgag
cgtcaatctagcaacgccctagtaaacaccgccaaacaggaggctgaccatgggtaa
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