Pseudomonas atacamensis: JWU58_06530
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Entry
JWU58_06530 CDS
T07336
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_06530
01503 Cationic antimicrobial peptide (CAMP) resistance
JWU58_06530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pata03036
]
JWU58_06530
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_06530
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_06530
Chromosome and associated proteins [BR:
pata03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JWU58_06530
Transporters [BR:
pata02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JWU58_06530
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWU58_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
YknX_C
BSH_CzcB
HH_MFP_RND
Biotin_lipoyl
RND-MFP_C
BSH_CusB
BSH_YknX
BSH_LcnD
CzcB_C
Beta-barrel_YknX
DUF6963
HH_EMRA
HH_CzcB
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QSL88941
LinkDB
All DBs
Position
complement(1399948..1401096)
Genome browser
AA seq
382 aa
AA seq
DB search
MLRRRMLIMLGVVLLLVLVLGGYKALSIYTMIQGFSKPKPPISVAVATAGEQPWQMRLPT
VGTLKALQGVDLSLEVSGTVTELKFESGQKVKAGQPLLQLDSAVETALLETARADLGLAQ
LDFGRGAQLVDSRAISKGEYDRLSAVLQKNKATVNQLNASLAKKRILAPFSGTIGIRQVD
VGDYLASGTKIATLQDLSSLYADFYVPEQAVPKLAIGQPVQFTVAAYPGQNFAGKISAIN
PIVESTTRNILVRATLANPDGKLLPGMFASLEVLLPDPQKHIVVPESAITYTLYGNSVYV
VGQKKAEDGSVAKDDNGQPLLIAERRFVETGERRDGLVMINKGVQSGEQVVTAGQIKLDN
GANIAISDDKTLGEQNSPPRVD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcgccgcatgctgatcatgttgggtgttgttttgctgctcgtcctggtgctg
ggcggttataaagccttgtcgatctacacgatgatccagggcttttccaagcccaagccg
ccgatcagcgtcgccgtagccactgccggcgaacagccgtggcagatgcgtctgcccacc
gtcggcacgctcaaggcgctgcaaggtgttgacttgagtctggaagtctccggcaccgtc
actgaactcaaattcgaatccgggcagaaggtcaaggccgggcaaccgttgctgcaactc
gacagcgccgtcgagaccgctctgttggaaaccgcccgcgccgacctcggcctggcgcaa
ctggacttcggccgtggcgcgcaactggtcgacagccgcgcgatctccaaaggcgagtac
gaccgcctctccgccgtgctgcaaaagaacaaggccacggtcaatcagctcaacgcgtcg
ctggcgaaaaagcgcatcctcgcgccattcagcggcaccatcggcatccgtcaggtcgac
gttggcgactacctcgccagcggcaccaaaatcgccacgttgcaggatttgagcagcctc
tacgctgacttctacgtgccggaacaagcggtgccgaaactcgctatcggtcagcccgtg
cagttcaccgtcgccgcttatccggggcagaactttgccggcaagatcagcgcgatcaac
ccgatcgtcgaaagcaccacgcgcaatatcctcgtccgcgccaccctggccaaccccgac
ggcaagctgctgccggggatgttcgccagccttgaagtgctgctgcctgatccgcaaaag
cacatcgtcgtgccggagagcgcgatcacctacaccctgtacggcaactcggtgtacgtg
gtcgggcagaagaaggccgaggacggcagcgtcgccaaggatgacaacggccaaccgctg
ctgatcgccgaacgtcgtttcgtcgaaaccggtgaacgccgcgatggcctggtgatgatc
aacaagggcgtgcagagcggcgaacaagtagtgacggcgggccagatcaaactggacaac
ggcgccaacattgccatcagcgacgacaagaccctcggcgagcagaacagtccgcctcgc
gtcgactga
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integrated database retrieval system
